RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 ZNF703Q9H7S9 590 aaPredicted RBP15.97■□□□□ 0.15
CLSTN3-210ENST00000540931 DKKL1Q9UK85 242 aa15.97■□□□□ 0.15
CLSTN3-210ENST00000540931 DOPEY2Q9Y3R5 2298 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 OR14I1A6ND48 311 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 GNB5O14775 395 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 STAMBPO95630 424 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 IGHG3P01860 377 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 NUDT7P0C024 238 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 HSD17B1P14061 328 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 PGCP20142 388 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 ADH6P28332 368 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 HTR1EP28566 365 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 CPA2P48052 419 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 ST13P50502 369 aaKnown RBP15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 GZMMP51124 257 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 PCBP3P57721 371 aaKnown RBP15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 SELPLGQ14242 412 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 COLEC12Q5KU26 742 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 BICRALQ6AI39 1079 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 ZNF324BQ6AW86 544 aaPredicted RBP15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 AAGABQ6PD74 315 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 DHRS4L2Q6PKH6 230 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 ZAR1Q86SH2 424 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 GALNT10Q86SR1 603 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 ATCAYQ86WG3 371 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 ARMC8Q8IUR7 673 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 DEFB107AQ8IZN7 70 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 EID3Q8N140 333 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 TMEM251Q8N6I4 163 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 OR5W2Q8NH69 310 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 ARSGQ96EG1 525 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 GPR137Q96N19 417 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 TAAR6Q96RI8 345 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 SLX1AQ9BQ83 275 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 PINK1Q9BXM7 581 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 MMADHCQ9H3L0 296 aaPredicted RBP15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 LDAHQ9H6V9 325 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 RUBCNLQ9H714 662 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 CMTM6Q9NX76 183 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 BAG5Q9UL15 447 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 FLNCQ14315 2725 aa15.96■□□□□ 0.15
CLSTN3-210ENST00000540931 ANKUB1A6NFN9 424 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 LRRC3CA6NJW4 275 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 G3V3Y1 287 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 SYT5O00445 386 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 FAAHO00519 579 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 GYG2O15488 501 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 UBOX5O94941 541 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 DPP4P27487 766 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 MAP2K6P52564 334 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 BNIP1Q12981 228 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 BNIP2Q12982 314 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 TOMM20Q15388 145 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 MAPK11Q15759 364 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 FNDC7Q5VTL7 733 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 APOOLQ6UXV4 268 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 IFNEQ86WN2 208 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 RBM15BQ8NDT2 890 aaKnown RBP15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 ST6GALNAC3Q8NDV1 305 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 FAM71CQ8NEG0 241 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 OR2M3Q8NG83 312 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 SARAFQ96BY9 339 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 GNRHR2Q96P88 292 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 CDRT15Q96T59 188 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 PIGQQ9BRB3 760 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 OR2B2Q9GZK3 357 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 ADPRHL2Q9NX46 363 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 MAGEL2Q9UJ55 1249 aa15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 ZNF443Q9Y2A4 671 aaPredicted RBP15.95■□□□□ 0.14
CLSTN3-210ENST00000540931 A0A1B0GVC2 190 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 C7orf72A4D263 438 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 CDHR4A6H8M9 788 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 NME4O00746 187 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 TRAPPC6AO75865 159 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 NUDT14O95848 222 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 ACTL6AO96019 429 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 T-ENOLP0DO92 83 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 ZNF17P17021 662 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 CHMP24386 653 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 PGM1P36871 562 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 MAGEA5P43359 124 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 HTR3AP46098 478 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 COPZ1P61923 177 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 SLC25A3Q00325 362 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 DESI1Q6ICB0 168 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 ENPP6Q6UWR7 440 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 C6orf89Q6UWU4 347 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 CCDC121Q6ZUS5 278 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 SIAH3Q8IW03 269 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 GALNT11Q8NCW6 608 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 ST8SIA1Q92185 356 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 C1GALT1C1Q96EU7 318 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 DSN1Q9H410 356 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 PLSCR2Q9NRY7 297 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 ASF1BQ9NVP2 202 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 FLRT3Q9NZU0 649 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 LUZP4Q9P127 313 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 ICAM5Q9UMF0 924 aa15.94■□□□□ 0.14
CLSTN3-210ENST00000540931 TRGV5A0A0B4J1U4 118 aa15.93■□□□□ 0.14
CLSTN3-210ENST00000540931 A0A0G2JMM0 328 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms