RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 GPR176Q14439 515 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 GRK1Q15835 563 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 C3orf38Q5JPI3 329 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 PDSS1Q5T2R2 415 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 C1orf189Q5VU69 101 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 PRAMEF9Q5VWM5 478 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 PRAMEF13Q5VWM6 474 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 CXorf57Q6NSI4 855 aaKnown RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 CDC73Q6P1J9 531 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 TMEM107Q6UX40 140 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 RBMS3Q6XE24 437 aaKnown RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 WDR53Q7Z5U6 358 aaPredicted RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 ADGRD2Q7Z7M1 963 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 HMGN2P46Q86SG4 172 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 IQCHQ86VS3 1027 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 MARCH9Q86YJ5 346 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 SAMD14Q8IZD0 417 aaPredicted RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 NXPE1Q8N323 547 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 PLA2G15Q8NCC3 412 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 CHST14Q8NCH0 376 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 ATOH1Q92858 354 aaPredicted RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 RBPMSQ93062 196 aaKnown RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 MMABQ96EY8 250 aaPredicted RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 SLC12A9Q9BXP2 914 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 BHLHE41Q9C0J9 482 aaPredicted RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 POLR2J3Q9H1A7 115 aaKnown RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 SLC2A4RGQ9NR83 387 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 GPATCH2Q9NW75 528 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 HPF1Q9NWY4 346 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 ZDHHC3Q9NYG2 299 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 APOBEC3BQ9UH17 382 aaKnown RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 TINAGQ9UJW2 476 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 KCND3Q9UK17 655 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 ACSL6Q9UKU0 697 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 OR51B4Q9Y5P0 310 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 IRAK3Q9Y616 596 aa4.9□□□□□ -1.62
PROM1-220ENST00000540805 SONP18583 2426 aaKnown RBP4.9□□□□□ -1.62
PROM1-220ENST00000540805 CACNA1IQ9P0X4 2223 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 IRGMA1A4Y4 181 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 FAAHO00519 579 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 TLX2O43763 284 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 B3GALT2O43825 422 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 FZD6O60353 706 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 NCR1O76036 304 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 LY86O95711 162 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 OLFM2O95897 454 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ARAFP10398 606 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 CTSAP10619 480 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 NTSR1P30989 418 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 FGF9P31371 208 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 VIPR1P32241 457 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 HBA1P69905 142 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ARF5P84085 180 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 FABP5Q01469 135 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 MC1RQ01726 317 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 CSTF1Q05048 431 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 TPBGQ13641 420 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 KCNC3Q14003 757 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 SHHQ15465 462 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ZSWIM7Q19AV6 140 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ZXDCQ2QGD7 858 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 DEFB110Q30KQ9 67 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 GPR33Q49SQ1 333 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 DEFB134Q4QY38 66 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ZNF385BQ569K4 471 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 OR2G6Q5TZ20 316 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 MTFR2Q6P444 385 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ADGRG3Q86Y34 549 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 DMRTC2Q8IXT2 367 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 ZNF433Q8N7K0 673 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 GATSQ8NAP1 163 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 OR4K1Q8NGD4 311 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 WDR20Q8TBZ3 569 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 RHBDD1Q8TEB9 315 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 CA5BP1Q8WTZ4 195 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 TRIM43Q96BQ3 446 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 SGTBQ96EQ0 304 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ALG14Q96F25 216 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 TOX2Q96NM4 488 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 TEFMQ96QE5 360 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 SLC22A12Q96S37 553 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 IL21Q9HBE4 155 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 TMEM27Q9HBJ8 222 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 ISYNA1Q9NPH2 558 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 IL26Q9NPH9 171 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 DZANK1Q9NVP4 752 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 CXXC1Q9P0U4 656 aaPredicted RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 ABI3Q9P2A4 366 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 TNFRSF10DQ9UBN6 386 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 LHX3Q9UBR4 397 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 SH3BGRL2Q9UJC5 107 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 SF3B6Q9Y3B4 125 aaKnown RBP4.9□□□□□ -1.63
PROM1-220ENST00000540805 BACE2Q9Y5Z0 518 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 CCDC88CQ9P219 2028 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 COL6A3P12111 3177 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 LOC105369274A0A096LPK9 316 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 XKRYO14609 159 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 TSPAN6O43657 245 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 UGDHO60701 494 aa4.9□□□□□ -1.63
PROM1-220ENST00000540805 APOL3O95236 402 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms