RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	TEK	Q02763	1124 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GPR176	Q14439	515 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SYT14P1	Q58G82	188 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	IDNK	Q5T6J7	187 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TIGD3	Q6B0B8	471 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TCTN3	Q6NUS6	607 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMEM65	Q6PI78	240 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	LIX1L	Q8IVB5	337 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GPR32P1	Q8NGA4	272 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR52N2	Q8NGI0	321 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR8J1	Q8NGP2	316 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC7A13	Q8TCU3	470 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	DNAJA4	Q8WW22	397 aa	Predicted RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RIT1	Q92963	219 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	COL26A1	Q96A83	441 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NACC2	Q96BF6	587 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PPCDC	Q96CD2	204 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MS4A3	Q96HJ5	214 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GPA33	Q99795	319 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ARHGAP9	Q9BRR9	750 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MARVELD1	Q9BSK0	173 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	LRRC61	Q9BV99	259 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SAP130	Q9H0E3	1048 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	KIR3DX1	Q9H7L2	352 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	EXTL2	Q9UBQ6	330 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CDH10	Q9Y6N8	788 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PATJ	Q8NI35	1801 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	COL4A4	P53420	1690 aa	Predicted RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TRBV5-4	A0A0C4DH59	114 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	C5orf58	C9J3I9	102 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ATP6V1G2-DDX39B	F2Z307	99 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783		M0R3H8	397 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CHP2	O43745	196 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PRMT3	O60678	531 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RAB36	O95755	333 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	KLK1	P06870	262 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NR2F6	P10588	404 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CPE	P16870	476 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	EVX1	P49640	407 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZNF81	P51508	661 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	HMGA2	P52926	109 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MAZ	P56270	477 aa	Known RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SNRPG	P62308	76 aa	Known RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	FOXC1	Q12948	553 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZNF791	Q3KP31	576 aa	Predicted RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PGBD2	Q6P3X8	592 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CHMP1B	Q7LBR1	199 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC51B	Q86UW2	128 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PPP1R3B	Q86XI6	285 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	LRRC17	Q8N6Y2	441 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	DUSP18	Q8NEJ0	188 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR11H7	Q8NGC8	314 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC37A2	Q8TED4	501 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	AP3S1	Q92572	193 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	RNFT2	Q96EX2	444 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TCTN2	Q96GX1	697 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZNF582	Q96NG8	517 aa	Predicted RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ATF6B	Q99941	703 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	UCK1	Q9HA47	277 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SEMA3G	Q9NS98	782 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NUDT15	Q9NV35	164 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZNF624	Q9P2J8	865 aa	Predicted RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PISD	Q9UG56	409 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	IL20RA	Q9UHF4	553 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ING4	Q9UNL4	249 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CORO2B	Q9UQ03	480 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ENTPD4	Q9Y227	616 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	GSTK1	Q9Y2Q3	226 aa		5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MRPS7	Q9Y2R9	242 aa	Known RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MTCL1	Q9Y4B5	1905 aa	Known RBP	5.29	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SPTBN2	O15020	2390 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	LAMA2	P24043	3122 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CACNA1A	O00555	2505 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783		A0A1W2PRB8	838 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ARHGEF33	A8MVX0	844 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PDPK1	O15530	556 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SEC14L5	O43304	696 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	EEF1E1	O43324	174 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	OR1F1	O43749	312 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SRPX2	O60687	465 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	HCN1	O60741	890 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC43A1	O75387	559 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	NME6	O75414	186 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ZNF821	O75541	412 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SLC16A8	O95907	504 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	CFD	P00746	253 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TFPI	P10646	304 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ELK1	P19419	428 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	ELAVL4	P26378	380 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TIA1	P31483	386 aa	Known RBP eCLIP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	BUD31	P41223	144 aa	Predicted RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	SSR2	P43308	183 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	WNT4	P56705	351 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PPP3R1	P63098	170 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	EEF1A2	Q05639	463 aa	Known RBP	5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	PCDH1	Q08174	1060 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	MEDAG	Q5VYS4	303 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	FIGLA	Q6QHK4	219 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	COMMD6	Q7Z4G1	85 aa		5.28	□□□□□ -1.56
RAPGEF4-215	ENST00000540783	TMPRSS12	Q86WS5	348 aa		5.28	□□□□□ -1.56

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