RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 AURKCQ9UQB9 309 aa17.3■□□□□ 0.36
TNFRSF1A-213ENST00000540022 H0YHG0 523 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 H3BNH8 94 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 K7EM74 188 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CDK2AP1O14519 115 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 OIP5O43482 229 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 UBTFL6P0CB48 400 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PSMA4P25789 261 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CLK3P49761 638 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CBLN3Q6UW01 205 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CARM1Q86X55 608 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 RBM45Q8IUH3 476 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GRAMD2AQ8IUY3 354 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PSD4Q8NDX1 1056 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 FAM71CQ8NEG0 241 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 VANGL1Q8TAA9 524 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PYDC1Q8WXC3 89 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 POP5Q969H6 163 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 NTNG2Q96CW9 530 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 DUS3LQ96G46 650 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 OSBPL11Q9BXB4 747 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ANGPTL4Q9BY76 406 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ARMC7Q9H6L4 198 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CCM2LQ9NUG4 571 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 KLHL28Q9NXS3 571 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CNIH4Q9P003 139 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLC13A4Q9UKG4 626 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLC35A3Q9Y2D2 325 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PCDHGA9Q9Y5G4 932 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 HRH3Q9Y5N1 445 aa17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 HELZ2Q9BYK8 2649 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-213ENST00000540022 G3V3Y1 287 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 FAM87AP0C7U9 286 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 UBL4AP11441 157 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ARG2P78540 354 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 VLDLRP98155 873 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CHRNB3Q05901 458 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 C19orf57Q0VDD7 668 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SNTA1Q13424 505 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 FAM98BQ52LJ0 330 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 TSEN54Q7Z6J9 526 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 MDS2Q8NDY4 140 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 DUSP19Q8WTR2 217 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GEMIN6Q8WXD5 167 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ARSGQ96EG1 525 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 C7orf34Q96L11 122 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 MAGIXQ9H6Y5 334 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CARD8Q9Y2G2 431 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 DOCK10Q96BY6 2186 aa17.28■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ANKRD33BA6NCL7 494 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GTPBP1O00178 669 aaKnown RBP17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ZNF264O43296 627 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ADAM11O75078 769 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLC25A12O75746 678 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CYP7B1O75881 506 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 MT-ND1P03886 318 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PDGFAP04085 211 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 P04436 131 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GKN3PP0CG01 181 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 RAP2AP10114 183 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PRG2P13727 222 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLC7A1P30825 629 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ZNF117Q03924 483 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SKP2Q13309 424 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 INPP5JQ15735 1006 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 NPTX1Q15818 432 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 ZSWIM7Q19AV6 140 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 IQCCQ4KMZ1 466 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLC30A6Q6NXT4 461 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 PAPD5Q8NDF8 572 aaKnown RBP17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CATSPER1Q8NEC5 780 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 OR6T1Q8NGN1 323 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 HES7Q9BYE0 225 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 AMBRA1Q9C0C7 1298 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 TIMMDC1Q9NPL8 285 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SACM1LQ9NTJ5 587 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 SLC9A8Q9Y2E8 581 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 CSAG2Q9Y5P2 127 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 WIF1Q9Y5W5 379 aa17.27■□□□□ 0.36
TNFRSF1A-213ENST00000540022 GCN1Q92616 2671 aaKnown RBP17.27■□□□□ 0.35
TNFRSF1A-213ENST00000540022 B4DXG7 233 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 hCG_2039718K7EN88 272 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 HCRTR2O43614 444 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TPST2O60704 377 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 FKBP6O75344 327 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ZNF136P52737 540 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 RGS8P57771 180 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 HOXC5Q00444 222 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 KCNC4Q03721 635 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 C17orf67Q0P5P2 114 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 TBCELQ5QJ74 424 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 OR5M10Q6IEU7 315 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 MISPQ8IVT2 679 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 SH3YL1Q96HL8 342 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 FRMD6Q96NE9 622 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 KLHDC3Q9BQ90 382 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 ARHGAP9Q9BRR9 750 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 PRR14Q9BWN1 585 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 CHID1Q9BWS9 393 aa17.26■□□□□ 0.35
TNFRSF1A-213ENST00000540022 IL1RAPQ9NPH3 570 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms