RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLITRK5O94991 958 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 MSL3P1P0C860 447 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 CDC42P60953 191 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 MAP4K2Q12851 820 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 PTGES3Q15185 160 aaKnown RBP15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 C1orf189Q5VU69 101 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 ZNF544Q6NX49 715 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 GALNT12Q8IXK2 581 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 OR52R1Q8NGF1 315 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 IFI44Q8TCB0 444 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 GTPBP3Q969Y2 492 aaKnown RBP15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 ARRDC1-AS1Q9H2J1 176 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 PIGUQ9H490 435 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 ACER3Q9NUN7 267 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 CNOT2Q9NZN8 540 aaKnown RBP15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 TBC1D24Q9ULP9 559 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 CARD8Q9Y2G2 431 aa15.84■□□□□ 0.13
PCDHB17P-201ENST00000539533 A0A075B6Q4 140 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 IGHV5-10-1A0A0J9YXX1 117 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 BLACEA4D250 179 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 M0R3H8 397 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 PCDH17O14917 1159 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 TOX3O15405 576 aaPredicted RBP15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 SYPP08247 313 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 RHCEP18577 417 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 HTR3AP46098 478 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 HSD17B7P56937 341 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 DOC2BQ14184 412 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 SSX1Q16384 188 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 EXOSC6Q5RKV6 272 aaKnown RBP15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 PRAMEF8Q5VWM4 474 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 PRAMEF7Q5VXH5 474 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 TCTN3Q6NUS6 607 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 VRK2Q86Y07 508 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 NAT6Q93015 286 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 SPATA5L1Q9BVQ7 753 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 LANCL2Q9NS86 450 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 CRNNQ9UBG3 495 aaPredicted RBP15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 TRAPPC4Q9Y296 219 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 HCN4Q9Y3Q4 1203 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 DSPPQ9NZW4 1301 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 SH3D21A4FU49 640 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 GPX5O75715 221 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 ALX3O95076 343 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 SSTR4P31391 388 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 TNFSF8P32971 234 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 DAB2P98082 770 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 DEF8Q6ZN54 512 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 FRRS1Q6ZNA5 592 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 UBQLNLQ8IYU4 475 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 OR8H2Q8N162 312 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 CDRT4Q8N9R6 151 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 OR4D9Q8NGE8 314 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 MVB12AQ96EY5 273 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 DEPDC7Q96QD5 511 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 SDF2Q99470 211 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 DPYSL5Q9BPU6 564 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 CALML5Q9NZT1 146 aa15.83■□□□□ 0.12
PCDHB17P-201ENST00000539533 WDFY3Q8IZQ1 3526 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 CCNB2O95067 398 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 AGR2O95994 175 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 CKMT1AP12532 417 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 LIMS1P48059 325 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZNF267Q14586 743 aaPredicted RBP15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 CDK10Q15131 360 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 ARHGAP11BQ3KRB8 267 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZFP69Q49AA0 526 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZNF311Q5JNZ3 666 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 PLAG1Q6DJT9 500 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 WDR36Q8NI36 951 aaKnown RBP15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 GPR151Q8TDV0 419 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 PTCHD1Q96NR3 888 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 DGAT2Q96PD7 388 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 TAPBPLQ9BX59 468 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 SMURF1Q9HCE7 757 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 FBXO34Q9NWN3 711 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 BOLA1Q9Y3E2 137 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 LGI1O95970 557 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 IFNA16P05015 189 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 ALPPP05187 535 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 CBLP22681 906 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 MPLP40238 635 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 MAP3K8P41279 467 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 NXNL2Q5VZ03 156 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 TYW3Q6IPR3 259 aaKnown RBP15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 PTCHD4Q6ZW05 846 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 NRARPQ7Z6K4 114 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 TMCO6Q96DC7 493 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 DMRTB1Q96MA1 342 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZNF304Q9HCX3 659 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 WDR70Q9NW82 654 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 CLN6Q9NWW5 311 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 FTSJ1Q9UET6 329 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 WDR45Q9Y484 360 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 CHST2Q9Y4C5 530 aa15.82■□□□□ 0.12
PCDHB17P-201ENST00000539533 ZAR1LA6NP61 321 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 A8MV72 311 aaPredicted RBP15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 MPZL2O60487 215 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 GADD45GO95257 159 aa15.81■□□□□ 0.12
PCDHB17P-201ENST00000539533 GABRA3P34903 492 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms