RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 DUSP8Q13202 625 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ZNF79Q15937 498 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 DEFB133Q30KQ1 61 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 CCNJQ5T5M9 372 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 SLX4IPQ5VYV7 408 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ZNF544Q6NX49 715 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 C19orf48Q6RUI8 117 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 BTN2A1Q7KYR7 527 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 LAX1Q8IWV1 398 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 CLDN23Q96B33 292 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 CTHRC1Q96CG8 243 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 SHDQ96IW2 340 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 SDF2Q99470 211 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 OR2B2Q9GZK3 357 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 MMP28Q9H239 520 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 MTHFD2LQ9H903 347 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ADAP2Q9NPF8 381 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 SEMA4GQ9NTN9 838 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 UCKL1Q9NWZ5 548 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 NDOR1Q9UHB4 597 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ENOPH1Q9UHY7 261 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 TRIOBPQ9H2D6 2365 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 A0A0A6YYC8 382 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-210ENST00000538120 PNMA8CA0A1B0GUJ8 204 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 TGFBR3LH3BV60 316 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 I3L1I5 382 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-210ENST00000538120 CCRL2O00421 344 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 THY1P04216 161 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 GFERP55789 205 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 GABREP78334 506 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 MRPS15P82914 257 aaKnown RBP9.97□□□□□ -0.81
CLIP1-210ENST00000538120 HOXC5Q00444 222 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 TARDBPQ13148 414 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLIP1-210ENST00000538120 EXOSC7Q15024 291 aaKnown RBP9.97□□□□□ -0.81
CLIP1-210ENST00000538120 MZT2BQ6NZ67 158 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 CD300LDQ6UXZ3 194 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 Q7L0L9 218 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ZNF367Q7RTV3 350 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 OR4K5Q8NGD3 323 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ASB15Q8WXK1 588 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 PIK3R3Q92569 461 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 DIO2Q92813 273 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 TCTN2Q96GX1 697 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ZNF285Q96NJ3 590 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 OPALINQ96PE5 141 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 SLC38A3Q99624 504 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ASPNQ9BXN1 380 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 BEX2Q9BXY8 128 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 TBC1D17Q9HA65 648 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 SMURF1Q9HCE7 757 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 HHATLQ9HCP6 504 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 TIGARQ9NQ88 270 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 FBXO34Q9NWN3 711 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 CFL2Q9Y281 166 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 ZNF443Q9Y2A4 671 aaPredicted RBP9.97□□□□□ -0.81
CLIP1-210ENST00000538120 NTNG1Q9Y2I2 539 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 V9GYH0 126 aa9.97□□□□□ -0.81
CLIP1-210ENST00000538120 NINQ8N4C6 2090 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 KNL1Q8NG31 2342 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 A0A087WUU8 490 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 LMO7DNF2Z398 122 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 SRPX2O60687 465 aaPredicted RBP9.96□□□□□ -0.81
CLIP1-210ENST00000538120 SDC3O75056 442 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 CSNK1EP49674 416 aaKnown RBP9.96□□□□□ -0.81
CLIP1-210ENST00000538120 CDC42P60953 191 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 KRR1Q13601 381 aaKnown RBP9.96□□□□□ -0.81
CLIP1-210ENST00000538120 MAPK14Q16539 360 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 ZFP69Q49AA0 526 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 Q5BKY6 102 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 C12orf73Q69YU5 71 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 C1orf94Q6P1W5 598 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 ZNF517Q6ZMY9 492 aaPredicted RBP9.96□□□□□ -0.81
CLIP1-210ENST00000538120 BCDIN3DQ7Z5W3 292 aaKnown RBP9.96□□□□□ -0.81
CLIP1-210ENST00000538120 OR8H1Q8NGG4 311 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 CRELD1Q96HD1 420 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 TAPBPLQ9BX59 468 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 CDCA4Q9BXL8 241 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 ZNF350Q9GZX5 532 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 POLR2J3Q9H1A7 115 aaKnown RBP9.96□□□□□ -0.81
CLIP1-210ENST00000538120 C11orf16Q9NQ32 467 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 SNTG1Q9NSN8 517 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 KCNE5Q9UJ90 142 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 WDR45Q9Y484 360 aa9.96□□□□□ -0.81
CLIP1-210ENST00000538120 IGHV5-51A0A0C4DH38 117 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 FAM172BPA6NC97 362 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 K7ESF4 209 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 ENTPD6O75354 484 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF254O75437 659 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 CBX7O95931 251 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 IFI6P09912 130 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 SLC35E2P0CK97 266 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 S1PR1P21453 382 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 EEF1A1P68104 462 aaKnown RBP9.96□□□□□ -0.82
CLIP1-210ENST00000538120 ALDH6A1Q02252 535 aaKnown RBP9.96□□□□□ -0.82
CLIP1-210ENST00000538120 MXD1Q05195 221 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 DMWDQ09019 674 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 TBRG1Q3YBR2 411 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 PAQR6Q6TCH4 344 aa9.96□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF836Q6ZNA1 936 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms