RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ANKS4BQ8N8V4 417 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 ZNF540Q8NDQ6 660 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 SEMA6DQ8NFY4 1073 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 OR4F6Q8NGB9 312 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 PHF21BQ96EK2 531 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 NSUN5Q96P11 429 aaKnown RBP9.8□□□□□ -0.84
CLPB-208ENST00000538021 SORCS2Q96PQ0 1159 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 OSBPL9Q96SU4 736 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 METTL17Q9H7H0 456 aaPredicted RBP9.8□□□□□ -0.84
CLPB-208ENST00000538021 C3orf14Q9HBI5 128 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 DDX18Q9NVP1 670 aaKnown RBP9.8□□□□□ -0.84
CLPB-208ENST00000538021 NMRK1Q9NWW6 199 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 KLHL9Q9P2J3 617 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 RNF14Q9UBS8 474 aa9.8□□□□□ -0.84
CLPB-208ENST00000538021 DMGDHQ9UI17 866 aaKnown RBP9.8□□□□□ -0.84
CLPB-208ENST00000538021 A0A0G2JK05 382 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 GNG14A0A1W2PPG7 69 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 GXYLT2A0PJZ3 443 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 TMEM89A2RUT3 159 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 FAM159BA6NKW6 160 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 GJE1A6NN92 205 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 GOLGA6L6A8MZA4 724 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 ALG1L2C9J202 215 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 PCDH7O60245 1069 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 OXSR1O95747 527 aaPredicted RBP9.79□□□□□ -0.84
CLPB-208ENST00000538021 IGHV3-9P01782 118 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 JUNP05412 331 aaKnown RBP9.79□□□□□ -0.84
CLPB-208ENST00000538021 COX5AP20674 150 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 NCBP2P52298 156 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLPB-208ENST00000538021 DR1Q01658 176 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 RASGEF1BQ0VAM2 473 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 FOXF1Q12946 379 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 METTL2BQ6P1Q9 378 aaKnown RBP9.79□□□□□ -0.84
CLPB-208ENST00000538021 UBE2J2Q8N2K1 259 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 SLC43A2Q8N370 569 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 ZNF433Q8N7K0 673 aaPredicted RBP9.79□□□□□ -0.84
CLPB-208ENST00000538021 LINC01356Q8N9X3 169 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.79□□□□□ -0.84
CLPB-208ENST00000538021 ACTRT2Q8TDY3 377 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 PIK3R3Q92569 461 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 VRK1Q99986 396 aaPredicted RBP9.79□□□□□ -0.84
CLPB-208ENST00000538021 KLHDC3Q9BQ90 382 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 PSD2Q9BQI7 771 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 FKRPQ9H9S5 495 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 BRF2Q9HAW0 419 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 BCO1Q9HAY6 547 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 HHATLQ9HCP6 504 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 NTMQ9P121 344 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 VPS29Q9UBQ0 182 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 MCM8Q9UJA3 840 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 SNX6Q9UNH7 406 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 C19orf53Q9UNZ5 99 aaPredicted RBP9.79□□□□□ -0.84
CLPB-208ENST00000538021 TRAF6Q9Y4K3 522 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 SLC25A15Q9Y619 301 aa9.79□□□□□ -0.84
CLPB-208ENST00000538021 HEATR1Q9H583 2144 aaKnown RBP9.79□□□□□ -0.84
CLPB-208ENST00000538021 A0A087WV62 115 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 CCT8L1PA6NM43 557 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 FAM157AC9JC47 383 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 UPK1AO00322 258 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 TP73O15350 636 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 C2P06681 752 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 HPGDP15428 266 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 APEX1P27695 318 aaKnown RBP9.78□□□□□ -0.84
CLPB-208ENST00000538021 IL2RGP31785 369 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 EIF1P41567 113 aaKnown RBP9.78□□□□□ -0.84
CLPB-208ENST00000538021 SNRPD2P62316 118 aaKnown RBP9.78□□□□□ -0.84
CLPB-208ENST00000538021 PHC1P78364 1004 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 SLC29A2Q14542 456 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 MLC1Q15049 377 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 GGTA1PQ4G0N0 100 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 GLE1Q53GS7 698 aaKnown RBP9.78□□□□□ -0.84
CLPB-208ENST00000538021 PRR31Q5SQ13 230 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 KLC3Q6P597 504 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 C3orf62Q6ZUJ4 267 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 OR4C3Q8NH37 302 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 B4GALNT2Q8NHY0 566 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 CDC26Q8NHZ8 85 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 GPR151Q8TDV0 419 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 ZFP90Q8TF47 636 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 ZNF300Q96RE9 604 aaPredicted RBP9.78□□□□□ -0.84
CLPB-208ENST00000538021 LMF2Q9BU23 707 aaKnown RBP9.78□□□□□ -0.84
CLPB-208ENST00000538021 COQ10BQ9H8M1 238 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 MYOZ1Q9NP98 299 aaPredicted RBP9.78□□□□□ -0.84
CLPB-208ENST00000538021 EQTNQ9NQ60 294 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 ING1Q9UK53 422 aaPredicted RBP9.78□□□□□ -0.84
CLPB-208ENST00000538021 PCTPQ9UKL6 214 aa9.78□□□□□ -0.84
CLPB-208ENST00000538021 ARFGEF3Q5TH69 2177 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 CCDC189A1A4V9 331 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 SERINC4A6NH21 518 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 MYO1GB0I1T2 1018 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 ZNF195O14628 629 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 RGS14O43566 566 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 EFNA2O43921 213 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 KLHL2O95198 593 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 NUDT14O95848 222 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 LINGO3P0C6S8 592 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 TSPAN8P19075 237 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 ELK4P28324 431 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 SLC7A1P30825 629 aa9.77□□□□□ -0.85
CLPB-208ENST00000538021 PRIM2P49643 509 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms