RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 MRI1Q9BV20 369 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TM7SF3Q9NS93 570 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM82A0PJX8 343 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PMM2O15305 246 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 UBL4AP11441 157 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CCKBRP32239 447 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 MEX3BQ6ZN04 569 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 FAM58AQ8N1B3 248 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF808Q8N4W9 903 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 BBS10Q8TAM1 723 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 RADILQ96JH8 1075 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 WDR77Q9BQA1 342 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ST6GALNAC5Q9BVH7 336 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 TBL1XR1Q9BZK7 514 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 NMNAT1Q9HAN9 279 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 CNIH4Q9P003 139 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 PLAGL1Q9UM63 463 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 STYXL1Q9Y6J8 313 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 VWA8A3KMH1 1905 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SLC22A31A6NKX4 558 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 DUXAA6NLW8 204 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SOX1O00570 391 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 STC1P52823 247 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 YBEYP58557 167 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 WDR5P61964 334 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SLC18B1Q6NT16 456 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 METTL21AQ8WXB1 218 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ZMYND19Q96E35 227 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 HOXD1Q9GZZ0 328 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF442Q9H7R0 627 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 BABAM2Q9NXR7 383 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 C5P01031 1676 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 A0A087X0M5 115 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 A0A1B0GX30 115 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 H2BFMP0C1H6 154 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 SNU13P55769 128 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 MRPS34P82930 218 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 BDH1Q02338 343 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 LCN10Q6JVE6 187 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OGFOD3Q6PK18 319 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 OR6V1Q8N148 313 aa5.36□□□□□ -1.55
CSMD1-215ENST00000537824 GMPR2Q9P2T1 348 aaKnown RBP5.36□□□□□ -1.55
CSMD1-215ENST00000537824 METTL15A6NJ78 407 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 THBS1P07996 1170 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OSMP13725 252 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ITGB5P18084 799 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 NTF3P20783 257 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 FCER1GP30273 86 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ADGRF1Q5T601 910 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 MOB1BQ7L9L4 216 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SYNPRQ8TBG9 265 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TMEM121BQ9BXQ6 578 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CD244Q9BZW8 370 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 XYLT2Q9H1B5 865 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ACACBO00763 2458 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 LOC102724200A0A096LPH7 203 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SYT5O00445 386 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SOCS6O14544 535 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 IFNGR1P15260 489 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SEC61A1P61619 476 aaKnown RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CD300CQ08708 224 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 RBMS2Q15434 407 aaKnown RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 RNF180Q86T96 592 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 AMZ2Q86W34 360 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CDKN2AIPNLQ96HQ2 116 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 HERPUD2Q9BSE4 406 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TRBV23OR9-2A0A075B6M9 112 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SRPX2O60687 465 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 MT-ND4LP03901 98 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 RPLP2P05387 115 aaKnown RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 JMJD7P0C870 316 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 POU3F4P49335 361 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 TAS2R19P59542 299 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SPOCK1Q08629 439 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 NHSL2Q5HYW2 709 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 BRAT1Q6PJG6 821 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF586Q9NXT0 402 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GRHPRQ9UBQ7 328 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 COPS7AQ9UBW8 275 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 C11orf98E9PRG8 122 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 PPP1R11O60927 126 aaPredicted RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 HBE1P02100 147 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ITGB2P05107 769 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CLDN6P56747 220 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CXADRP78310 365 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CAP1Q01518 475 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SQSTM1Q13501 440 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SLC38A6Q8IZM9 456 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CCDC71LQ8N9Z2 235 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 OR5M3Q8NGP4 307 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ZBTB8AQ96BR9 441 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF251Q9BRH9 671 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GSX2Q9BZM3 304 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 GAREM1Q9H706 876 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 THSD1Q9NS62 852 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CNOT2Q9NZN8 540 aaKnown RBP5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SLC23A1Q9UHI7 598 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 CORINQ9Y5Q5 1042 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 MYBPHLA2RUH7 354 aa5.35□□□□□ -1.55
CSMD1-215ENST00000537824 SURF4O15260 269 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms