RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 NTSR1P30989 418 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 OTX2P32243 289 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SCAPQ12770 1279 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 VEZF1Q14119 521 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 LCN10Q6JVE6 187 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 OR51L1Q8NGJ5 315 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 TAAR8Q969N4 342 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SLC12A9Q9BXP2 914 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 SLC25A31Q9H0C2 315 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 THSD1Q9NS62 852 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 TMEM181Q9P2C4 612 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ENTPD2Q9Y5L3 495 aa10.04□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF840PA6NDX5 716 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 TP53P04637 393 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 TNFSF4P23510 183 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 DCTP40126 519 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 RGNQ15493 299 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 CST6Q15828 149 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 DCP2Q8IU60 420 aaKnown RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 BBS1Q8NFJ9 593 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 ADAMTS14Q8WXS8 1223 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 DAZAP1Q96EP5 407 aaKnown RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 OR51J1Q9H342 316 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 PCDHA9Q9Y5H5 950 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 MAP1BP46821 2468 aaKnown RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 ANKRD34BA5PLL1 514 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 AGPAT2O15120 278 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 CASC3O15234 703 aaKnown RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 UGDHO60701 494 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 STC2O76061 302 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 UPP1Q16831 310 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 MEX3BQ6ZN04 569 aaKnown RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 FAM217AQ8IXS0 508 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SUMF2Q8NBJ7 301 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 OR5W2Q8NH69 310 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 DOK4Q8TEW6 326 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 UPRTQ96BW1 309 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SDSLQ96GA7 329 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SERINC2Q96SA4 455 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SPATA6Q9NWH7 488 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 NME7Q9Y5B8 376 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 A0A087WUU8 490 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 TSTD3H0UI37 97 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 PIP5K1CO60331 668 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 MITFO75030 526 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 ZNF780AO75290 641 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 FUT1P19526 365 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 HOXD12P35452 270 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 NR4A2P43354 598 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SRYQ05066 204 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 AARDQ4LEZ3 155 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 TP53I3Q53FA7 332 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 IQCF1Q8N6M8 205 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 NPRL2Q8WTW4 380 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 RSC1A1Q92681 617 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 FOXRED1Q96CU9 486 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 ZMYND19Q96E35 227 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 ST6GALNAC5Q9BVH7 336 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 DPH1Q9BZG8 443 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 LHPPQ9H008 270 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 OR10A5Q9H207 317 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 OR10A2Q9H208 303 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SACM1LQ9NTJ5 587 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 BTNL2Q9UIR0 455 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 AK6Q9Y3D8 172 aaKnown RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SLC22A7Q9Y694 548 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 HEPACAM2A8MVW5 462 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 F5H5K5 113 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 PROS1P07225 676 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SGSHP51688 502 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 ERVK-25P63136 954 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SELENOWP63302 87 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 CNN3Q15417 329 aaKnown RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 OR4D1Q15615 310 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 PLAG1Q6DJT9 500 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 NADSYN1Q6IA69 706 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 ABHD12BQ7Z5M8 362 aaPredicted RBP10.03□□□□□ -0.8
CLIP1-209ENST00000537178 NOXA1Q86UR1 476 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 MKXQ8IYA7 352 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 CYB561A3Q8NBI2 242 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 OR5D14Q8NGL3 314 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 NPLOC4Q8TAT6 608 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 SLC17A9Q9BYT1 436 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 ANKRD60Q9BZ19 345 aa10.03□□□□□ -0.8
CLIP1-209ENST00000537178 GAPDHSO14556 408 aaPredicted RBP10.02□□□□□ -0.8
CLIP1-209ENST00000537178 ARPC1BO15143 372 aaKnown RBP10.02□□□□□ -0.8
CLIP1-209ENST00000537178 WDPCPO95876 746 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 NKX2-5P52952 324 aaPredicted RBP10.02□□□□□ -0.8
CLIP1-209ENST00000537178 KEAP1Q14145 624 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 MSMO1Q15800 293 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 SLC6A19Q695T7 634 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 GPR155Q7Z3F1 870 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 TPRA1Q86W33 373 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 SULF2Q8IWU5 870 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 PINK1Q9BXM7 581 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 C8orf33Q9H7E9 229 aaPredicted RBP10.02□□□□□ -0.8
CLIP1-209ENST00000537178 PLEK2Q9NYT0 353 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 GPR160Q9UJ42 338 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 HHLA2Q9UM44 414 aa10.02□□□□□ -0.8
CLIP1-209ENST00000537178 LOC102725191A0A1B0GVB3 256 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms