RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PIAS2O75928 621 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 MED26O95402 600 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 HTR2AP28223 471 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 IDUAP35475 653 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 GCGRP47871 477 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 FNTBP49356 437 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 ARL4DP49703 201 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 KRR1Q13601 381 aaKnown RBP12.57□□□□□ -0.4
SMG6-203ENST00000536871 FGFBP1Q14512 234 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 NANOGNBQ7Z5D8 188 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 LAPTM4BQ86VI4 370 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 OR51Q1Q8NH59 317 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 FANK1Q8TC84 345 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 TGM7Q96PF1 710 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 DUSP15Q9H1R2 295 aaPredicted RBP12.57□□□□□ -0.4
SMG6-203ENST00000536871 SLC35A3Q9Y2D2 325 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 CORINQ9Y5Q5 1042 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 SLCO1B1Q9Y6L6 691 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 PMF1-BGLAPU3KQ54 211 aa12.57□□□□□ -0.4
SMG6-203ENST00000536871 ARHGEF17Q96PE2 2063 aaPredicted RBP12.56□□□□□ -0.4
SMG6-203ENST00000536871 CEP290O15078 2479 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 GXYLT2A0PJZ3 443 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 TMEM150CB9EJG8 249 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 IFI30P13284 250 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 GPR4P46093 362 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 GPR143P51810 404 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 ARPC4P59998 168 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 PSPHP78330 225 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 HSD11B2P80365 405 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 HOXC5Q00444 222 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
SMG6-203ENST00000536871 ITGADQ13349 1161 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 TPBGQ13641 420 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 ZNF267Q14586 743 aaPredicted RBP12.56□□□□□ -0.4
SMG6-203ENST00000536871 SSX1Q16384 188 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 ULK3Q6PHR2 472 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 LNX2Q8N448 690 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 DNAJA4Q8WW22 397 aaPredicted RBP12.56□□□□□ -0.4
SMG6-203ENST00000536871 BPIFA2Q96DR5 249 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 OR52D1Q9H346 318 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 UBQLN3Q9H347 655 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 INPP5EQ9NRR6 644 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 SEMA5BQ9P283 1151 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 KCNE5Q9UJ90 142 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 UGT2A1Q9Y4X1 527 aa12.56□□□□□ -0.4
SMG6-203ENST00000536871 NPIPB9F8W1W9 429 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 J3QRK9 145 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 POLR1CO15160 346 aaPredicted RBP12.55□□□□□ -0.4
SMG6-203ENST00000536871 LYPD3O95274 346 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 TSPAN19P0C672 248 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 GAAP10253 952 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 GLB1P16278 677 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 PAICSP22234 425 aaKnown RBP12.55□□□□□ -0.4
SMG6-203ENST00000536871 CD1CP29017 333 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 ADH7P40394 386 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 ETV6P41212 452 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 LSM11P83369 360 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMG6-203ENST00000536871 BDH1Q02338 343 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CLEC12AQ5QGZ9 265 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 PDZK1Q5T2W1 519 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 SLC30A6Q6NXT4 461 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 PHC2Q8IXK0 858 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 ZNF527Q8NB42 609 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 OR4Q3Q8NH05 313 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 OR52N1Q8NH53 320 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 UFD1Q92890 307 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 ART5Q96L15 291 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CENPOQ9BU64 300 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 ZNF426Q9BUY5 554 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 MROQ9BYG7 248 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 OR10A5Q9H207 317 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 TAS2R16Q9NYV7 291 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 RPS6KB2Q9UBS0 482 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CBLCQ9ULV8 474 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 OR10H1Q9Y4A9 318 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CACNA1IQ9P0X4 2223 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 IGHV5-51A0A0C4DH38 117 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 ZNF670-ZNF695F2Z2N8 137 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 BCAT2O15382 392 aaPredicted RBP12.55□□□□□ -0.4
SMG6-203ENST00000536871 AKAP8O43823 692 aaKnown RBP12.55□□□□□ -0.4
SMG6-203ENST00000536871 PPM1BO75688 479 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 IGF2P01344 180 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 IGHA1P01876 353 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 IFNA16P05015 189 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 GKN3PP0CG01 181 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CKMT1AP12532 417 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 BMP4P12644 408 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 GALP22466 123 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 CXCL12P48061 93 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 GAS1P54826 345 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 DCAF7P61962 342 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 RUNX1T1Q06455 604 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 ZNF181Q2M3W8 571 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 DEFB133Q30KQ1 61 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 ANKDD1AQ495B1 522 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 SMARCD3Q6STE5 483 aa12.55□□□□□ -0.4
SMG6-203ENST00000536871 RTL4Q6ZR62 310 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms