RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SNTB1Q13884 538 aaKnown RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 RCAN2Q14206 197 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 TOMM34Q15785 309 aaPredicted RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 HSPB2Q16082 182 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 BCL2A1Q16548 175 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 TYW3Q6IPR3 259 aaKnown RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 MEX3BQ6ZN04 569 aaKnown RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 C16orf62Q7Z3J2 963 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 FUNDC1Q8IVP5 155 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 MISPQ8IVT2 679 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 B4GALNT2Q8NHY0 566 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 FIG4Q92562 907 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 ZG16BQ96DA0 208 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 DTNBP1Q96EV8 351 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 AURKBQ96GD4 344 aaPredicted RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF845Q96IR2 970 aaPredicted RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 MAGEB18Q96M61 343 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 RNF145Q96MT1 663 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 UCN2Q96RP3 112 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 SPOCK3Q9BQ16 436 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 TREX2Q9BQ50 279 aaPredicted RBP11.87□□□□□ -0.51
PRKDC-206ENST00000536429 PIGQQ9BRB3 760 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 HOXD1Q9GZZ0 328 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 ICAM5Q9UMF0 924 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 DTNAQ9Y4J8 743 aa11.87□□□□□ -0.51
PRKDC-206ENST00000536429 TACC2O95359 2948 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 FAM234BA2RU67 622 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 SERINC4A6NH21 518 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 FAM47E-STBD1D6RA91 191 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 RFXANKO14593 260 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 KIAA0513O60268 411 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 STX11O75558 287 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 SOX30O94993 753 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 TGDSO95455 350 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 AK1P00568 194 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 IL2RAP01589 272 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 LINGO3P0C6S8 592 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 PEPDP12955 493 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 SHC1P29353 583 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 KHKP50053 298 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 MVDP53602 400 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 PLAURQ03405 335 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 CHRNEQ04844 493 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 FOXF1Q12946 379 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF141Q15928 474 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 SLC25A35Q3KQZ1 300 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 GLYR1Q49A26 553 aaPredicted RBP11.86□□□□□ -0.51
PRKDC-206ENST00000536429 SLC2A7Q6PXP3 512 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 FRRS1Q6ZNA5 592 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 GGNQ86UU5 652 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 GCNT2Q8N0V5 402 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 GTPBP8Q8N3Z3 284 aaPredicted RBP11.86□□□□□ -0.51
PRKDC-206ENST00000536429 ANKFN1Q8N957 763 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF527Q8NB42 609 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 RFWD2Q8NHY2 731 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 ZFP90Q8TF47 636 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 WNT2BQ93097 391 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 ROPN1LQ96C74 230 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 INTS12Q96CB8 462 aaKnown RBP11.86□□□□□ -0.51
PRKDC-206ENST00000536429 CCDC28BQ9BUN5 200 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 NMUR2Q9GZQ4 415 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 QRSL1Q9H0R6 528 aaKnown RBP11.86□□□□□ -0.51
PRKDC-206ENST00000536429 TMEM185BQ9H7F4 350 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 EXD2Q9NVH0 621 aa11.86□□□□□ -0.51
PRKDC-206ENST00000536429 INTS1Q8N201 2190 aaKnown RBP11.86□□□□□ -0.51
PRKDC-206ENST00000536429 A0A087WZY1 265 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 CLDN24A6NM45 220 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 GTPBP1O00178 669 aaKnown RBP11.85□□□□□ -0.51
PRKDC-206ENST00000536429 EFNA2O43921 213 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 CHRM4P08173 479 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 TMIGD3P0DMS9 266 aaPredicted RBP11.85□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF17P17021 662 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 CTSSP25774 331 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 MRPL19P49406 292 aaKnown RBP11.85□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF41P51814 821 aaPredicted RBP11.85□□□□□ -0.51
PRKDC-206ENST00000536429 SF3B4Q15427 424 aaKnown RBP eCLIP11.85□□□□□ -0.51
PRKDC-206ENST00000536429 MAPK11Q15759 364 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 SYPL1Q16563 259 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 ATAD3BQ5T9A4 648 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 MTERF4Q7Z6M4 381 aaKnown RBP11.85□□□□□ -0.51
PRKDC-206ENST00000536429 GRAMD2AQ8IUY3 354 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 MEIOBQ8N635 442 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 GPR119Q8TDV5 335 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 GTF2H4Q92759 462 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 PINK1Q9BXM7 581 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 ZNF629Q9UEG4 869 aaPredicted RBP11.85□□□□□ -0.51
PRKDC-206ENST00000536429 DCTN4Q9UJW0 460 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 L3MBTL1Q9Y468 752 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 WDR45Q9Y484 360 aa11.85□□□□□ -0.51
PRKDC-206ENST00000536429 POLQO75417 2590 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 C7orf72A4D263 438 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 H3BNH8 94 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 EIF1AYO14602 144 aaKnown RBP11.84□□□□□ -0.51
PRKDC-206ENST00000536429 DVL2O14641 736 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 EDF1O60869 148 aaKnown RBP11.84□□□□□ -0.51
PRKDC-206ENST00000536429 CYP7B1O75881 506 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 RCBTB2O95199 551 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 H6PDO95479 791 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 AGR2O95994 175 aa11.84□□□□□ -0.51
PRKDC-206ENST00000536429 UBL4AP11441 157 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms