RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 USH1CQ9Y6N9 552 aa12.85□□□□□ -0.35
UBE3B-206ENST00000536398 A0A087WZY1 265 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 CCDC154A6NI56 674 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 SLC22A20A6NK97 555 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 DUXAA6NLW8 204 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 LINC01387J3KSC0 135 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 EFNA2O43921 213 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 TNFSF13O75888 250 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 SOX30O94993 753 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 IL18BPO95998 194 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 LINGO3P0C6S8 592 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 OPRM1P35372 400 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 CHI3L1P36222 383 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-206ENST00000536398 SLC6A8P48029 635 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 MAPK14Q16539 360 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 ARHGAP11BQ3KRB8 267 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 FBXL19-AS1Q494R0 122 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 PDCD4Q53EL6 469 aaKnown RBP12.84□□□□□ -0.35
UBE3B-206ENST00000536398 PDZK1Q5T2W1 519 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 HEPHL1Q6MZM0 1159 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 CHMP1BQ7LBR1 199 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 P4HA3Q7Z4N8 544 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 RNF130Q86XS8 419 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 ZZZ3Q8IYH5 903 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 GTPBP8Q8N3Z3 284 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-206ENST00000536398 ZNF527Q8NB42 609 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 OR9I1Q8NGQ6 314 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 GOT1L1Q8NHS2 421 aaPredicted RBP12.84□□□□□ -0.35
UBE3B-206ENST00000536398 RFWD2Q8NHY2 731 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 LRRC8CQ8TDW0 803 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 RNASE6Q93091 150 aaKnown RBP12.84□□□□□ -0.35
UBE3B-206ENST00000536398 ZG16BQ96DA0 208 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 NEURL3Q96EH8 262 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 PANX1Q96RD7 426 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 ZBTB18Q99592 522 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 DTNAQ9Y4J8 743 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 AP4B1Q9Y6B7 739 aa12.84□□□□□ -0.35
UBE3B-206ENST00000536398 PDZD2O15018 2839 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 GTPBP1O00178 669 aaKnown RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 EIF1AYO14602 144 aaKnown RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 UBDO15205 165 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 BCAS1O75363 584 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 STX11O75558 287 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 SLC22A3O75751 556 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 UGT2B17O75795 530 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 SASH3O75995 380 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 IDO1P14902 403 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 SHC1P29353 583 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 IDH3AP50213 366 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF41P51814 821 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 FOXF1Q12946 379 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 MYBPHQ13203 477 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 PON3Q15166 354 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 CTU2Q2VPK5 515 aaKnown RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 COX20Q5RI15 118 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 TYW3Q6IPR3 259 aaKnown RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 VWA1Q6PCB0 445 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF621Q6ZSS3 439 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 C16orf62Q7Z3J2 963 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 MTERF4Q7Z6M4 381 aaKnown RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 LUZP2Q86TE4 346 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 LSRQ86X29 649 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 METTL25Q8N6Q8 603 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 FNDC9Q8TBE3 224 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 PNPT1Q8TCS8 783 aaKnown RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 GPR119Q8TDV5 335 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 ZBTB8AQ96BR9 441 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 C7orf26Q96N11 449 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 EBF4Q9BQW3 602 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF559Q9BR84 538 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 SFXN3Q9BWM7 321 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF350Q9GZX5 532 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 MCCC2Q9HCC0 563 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 SDR39U1Q9NRG7 319 aaPredicted RBP12.83□□□□□ -0.36
UBE3B-206ENST00000536398 CRIM1Q9NZV1 1036 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 KCNN3Q9UGI6 736 aa12.83□□□□□ -0.36
UBE3B-206ENST00000536398 MED12LQ86YW9 2145 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 A0A0J9YW62 118 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 A0A1W2PNV4 684 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 C7orf72A4D263 438 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 SERINC4A6NH21 518 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 HMGN4O00479 90 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 AQP8O94778 261 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 NUDT14O95848 222 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF17P17021 662 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 KIR2DL2P43627 348 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-206ENST00000536398 KIR2DL3P43628 341 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 EIF1AXP47813 144 aaKnown RBP12.82□□□□□ -0.36
UBE3B-206ENST00000536398 P2RX1P51575 399 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 EEFSECP57772 596 aaKnown RBP12.82□□□□□ -0.36
UBE3B-206ENST00000536398 CHRNEQ04844 493 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 ZNF141Q15928 474 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 GSTA3Q16772 222 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 GTDC1Q4AE62 458 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 DNAJC14Q6Y2X3 702 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-206ENST00000536398 ANKFN1Q8N957 763 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 FBXO27Q8NI29 283 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 LINC01560Q8TB33 94 aa12.82□□□□□ -0.36
UBE3B-206ENST00000536398 VPS33AQ96AX1 596 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms