RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 NRSN2Q9GZP1 204 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TOLLIPQ9H0E2 274 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TKTL2Q9H0I9 626 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 C20orf85Q9H1P6 137 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 PPP1R14DQ9NXH3 145 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 FEM1BQ9UK73 627 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ATG4BQ9Y4P1 393 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 STYXL1Q9Y6J8 313 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 A0A1B0GVI7 797 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 LOC285095A0A1B0GVY8 99 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 AGAP14A8MT82 685 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PHOX2AO14813 284 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TGM5O43548 720 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PCDH8O95206 1070 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 NTN1O95631 604 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RAB3DO95716 219 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GUCA1CO95843 209 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 IL1AP01583 271 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 IGHA1P01876 353 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ADH1AP07327 375 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SLC35G4P0C7Q5 338 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PRR35P0CG20 571 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CXCL8P10145 99 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CELP19835 753 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CHI3L1P36222 383 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 MAP3K8P41279 467 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 MATKP42679 507 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GZMMP51124 257 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 AP3S2P59780 193 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 HNRNPKP61978 463 aaKnown RBP eCLIP3.47□□□□□ -1.85
MCF2-210ENST00000536274 PPP3R1P63098 170 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 KIAA0040Q15053 153 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 DPYSL2Q16555 572 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF791Q3KP31 576 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 SLC25A35Q3KQZ1 300 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF385CQ66K41 422 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 PAPD4Q6PIY7 484 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 PAQR3Q6TCH7 311 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ANGPTL8Q6UXH0 198 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 Q7L0L9 218 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 FAM129CQ86XR2 697 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GPSM1Q86YR5 675 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CLECL1Q8IZS7 167 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SPAG16Q8N0X2 631 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 FAM24BQ8N5W8 94 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 METTL27Q8N6F8 245 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 C2CD4AQ8NCU7 369 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 OR11G2Q8NGC1 345 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 OR6J1Q8NGC5 347 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 OR51Q1Q8NH59 317 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RNASE11Q8TAA1 199 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 NEIL3Q8TAT5 605 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ACER1Q8TDN7 264 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SETD7Q8WTS6 366 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 SMAP2Q8WU79 429 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 KAT2AQ92830 837 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 L3HYPDHQ96EM0 354 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 IP6K3Q96PC2 410 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 COPS8Q99627 209 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 TSSK6Q9BXA6 273 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CDCA4Q9BXL8 241 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 OR51B6Q9H340 312 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 PLCXD1Q9NUJ7 323 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF214Q9UL59 606 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 UBQLN1Q9UMX0 589 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 ERVW-1Q9UQF0 538 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 NME7Q9Y5B8 376 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 BRCA2P51587 3418 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 IQCF5A8MTL0 148 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 C9JQL5 133 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 E7EQ34 232 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 H3BN98 237 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 IFNL4K9M1U5 179 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SGK494L7N484 410 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 EIF1AYO14602 144 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 GOSR2O14653 212 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 B4GALT5O43286 388 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 HYAL3O43820 417 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 GALR3O60755 368 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 LILRB5O75023 590 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 STX11O75558 287 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 CD2P06729 351 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SNRNP70P08621 437 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 PPP3CBP16298 524 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 HOXB8P17481 243 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 CNR1P21554 472 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 UQCRC2P22695 453 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ITGB7P26010 798 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GABRR2P28476 465 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 RORAP35398 523 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SULT1E1P49888 294 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 GPR143P51810 404 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 ZNF140P52738 457 aaPredicted RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 MAT1AQ00266 395 aaKnown RBP3.47□□□□□ -1.85
MCF2-210ENST00000536274 IL10RBQ08334 325 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 LCP2Q13094 533 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 NDUFAF6Q330K2 333 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 DEGS2Q6QHC5 323 aa3.47□□□□□ -1.85
MCF2-210ENST00000536274 SPNS3Q6ZMD2 512 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms