RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 CD300LBA8K4G0 201 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 PVRP15151 417 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 UGT2B7P16662 529 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 GABRR1P24046 479 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 RGS6P49758 472 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF252P-AS1Q0IIN9 211 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 TAS1R1Q7RTX1 841 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 SHISA4Q96DD7 197 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 UHRF1Q96T88 793 aaPredicted RBP17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 SLC6A16Q9GZN6 736 aa17.08■□□□□ 0.32
SFSWAP-203ENST00000535236 A0A087WUU8 490 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 LOC105369274A0A096LPK9 316 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 TMEM189-UBE2V1I3L0A0 370 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 CYB5BO43169 146 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 IGHEP01854 428 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 CHRM4P08173 479 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 MYF6P23409 242 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 PCBD1P61457 104 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 SLC7A9P82251 487 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 VEZF1Q14119 521 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 OR4N4Q8N0Y3 316 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 ADAMTS19Q8TE59 1207 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 GPN2Q9H9Y4 310 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 MDFIC2A0A1B0GVS7 189 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 ARGFXA6NJG6 315 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 BCAT2O15382 392 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 SDC1P18827 310 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 OR5D14Q8NGL3 314 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 TSPAN10Q9H1Z9 355 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 GSTO2Q9H4Y5 243 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 TMEM45AQ9NWC5 275 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 NLKQ9UBE8 527 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 D6RAR5 112 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 FGF4P08620 206 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 TFPTP0C1Z6 253 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 HOXA9P31269 272 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 ALDH3B2P48448 385 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF136P52737 540 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 SQSTM1Q13501 440 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 TMEM244Q5VVB8 128 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 KIAA1211LQ6NV74 962 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 OR51Q1Q8NH59 317 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 SNAPC3Q92966 411 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 MUCL1Q96DR8 90 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 GIMAP5Q96F15 307 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 COG8Q96MW5 612 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 TAAR2Q9P1P5 351 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 AK6Q9Y3D8 172 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 SC5DO75845 299 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 CTSCP53634 463 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 MCCD1P59942 119 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 MRPS21P82921 87 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 PDZD9Q8IXQ8 264 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 OR14K1Q8NGZ2 314 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 CNOT9Q92600 299 aaKnown RBP17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 PRRC1Q96M27 445 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF300Q96RE9 604 aaPredicted RBP17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 ULBP3Q9BZM4 244 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 OR6C6A6NF89 314 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 RAB3DO95716 219 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 WDPCPO95876 746 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 PTHP01270 115 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 TAS2R20P59543 309 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 NCS1P62166 190 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 PIP5KL1Q5T9C9 394 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 BPIFA2Q96DR5 249 aa17.07■□□□□ 0.32
SFSWAP-203ENST00000535236 A0A1W2PQL4 384 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 ANKRD34BA5PLL1 514 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 DRD5P21918 477 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 ETV4P43268 484 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 SEC61A1P61619 476 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 CLDN10P78369 228 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF696Q9H7X3 374 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 SDR39U1Q9NRG7 319 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 THSD1Q9NS62 852 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 WASH4PA8MWX3 477 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 F3P13726 295 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 AQP2P41181 271 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 CSNK1DP48730 415 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 WNT7BP56706 349 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 PAGE3Q5JUK9 113 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 GARNL3Q5VVW2 1013 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 WBP2NLQ6ICG8 309 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 XRN1Q8IZH2 1706 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF44P15621 663 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 MEX3BQ6ZN04 569 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 TMEFF1Q8IYR6 380 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 GTPBP8Q8N3Z3 284 aaPredicted RBP17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 IL17RDQ8NFM7 739 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 NGBQ9NPG2 151 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF337Q9Y3M9 751 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 PCDHGA7Q9Y5G6 932 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 CCDC163A0A0D9SF12 145 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 CSF1P09603 554 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 BMXP51813 675 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 MBTPS1Q14703 1052 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 IL20RBQ6UXL0 311 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 KCTD20Q7Z5Y7 419 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms