RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 SLC32A1Q9H598 525 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 GPN3Q9UHW5 284 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 KCNK6Q9Y257 313 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 A3GALT2U3KPV4 340 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 V9GYH0 126 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 A0A1W2PPV9 198 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 FAM234BA2RU67 622 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 SLC31A1O15431 190 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 GATCO43716 136 aaKnown RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CEACAM5P06731 702 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CD3GP09693 182 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CBSLP0DN79 551 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 HOXB1P14653 301 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CBSP35520 551 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PXNP49023 591 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CCR6P51684 374 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 RBM39Q14498 530 aaKnown RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 HYAL4Q2M3T9 481 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PLEKHS1Q5SXH7 462 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 LYPLAL1Q5VWZ2 237 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 SZRD1Q7Z422 152 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 THOC6Q86W42 341 aaKnown RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 TSPEARQ8WU66 669 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PDXPQ96GD0 296 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PRO1933Q9H354 126 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 TCEAL2Q9H3H9 227 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 C3orf14Q9HBI5 128 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 C1orf109Q9NX04 203 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CCDC88CQ9P219 2028 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 A0A1W2PQU0 124 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 MAGEB17A8MXT2 336 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PRMT3O60678 531 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 TRIM3O75382 744 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 SLC43A1O75387 559 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 GADD45GO95257 159 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 RLN1P04808 185 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CD2P06729 351 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PEPDP12955 493 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 HOXB9P17482 250 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PAICSP22234 425 aaKnown RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 TBPL1P62380 186 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 STX4Q12846 297 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PDZK1IP1Q13113 114 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 BAMBIQ13145 260 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 SERTAD2Q14140 314 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 GANABQ14697 944 aaKnown RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 SPHARQ15513 63 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 MZT2AQ6P582 158 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 TRIM46Q7Z4K8 759 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 MARCH9Q86YJ5 346 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 RIMKLAQ8IXN7 391 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 YAF2Q8IY57 180 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 TOMM5Q8N4H5 51 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 OR14C36Q8NHC7 312 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 FEVQ99581 238 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 RSPO3Q9BXY4 272 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 FGF22Q9HCT0 170 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 CLEC2DQ9UHP7 191 aa8.45□□□□□ -1.06
SF3B2-216ENST00000534765 TMEFF2Q9UIK5 374 aaPredicted RBP8.45□□□□□ -1.06
SF3B2-216ENST00000534765 PRR19A6NJB7 356 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 LRRTM2O43300 516 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 PROM1O43490 865 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 VPS4BO75351 444 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 AK4P27144 223 aaPredicted RBP8.44□□□□□ -1.06
SF3B2-216ENST00000534765 BMP8BP34820 402 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 AKR1C3P42330 323 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 OR1E2P47887 323 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 PSMA6P60900 246 aaKnown RBP8.44□□□□□ -1.06
SF3B2-216ENST00000534765 TAP2Q03519 686 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 CHIT1Q13231 466 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 ALG11Q2TAA5 492 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 CASP12Q6UXS9 341 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 IZUMO1Q8IYV9 350 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 DNAJC22Q8N4W6 341 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 OR10K1Q8NGX5 313 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 RFT1Q96AA3 541 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 REPS1Q96D71 796 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 TMEM43Q9BTV4 400 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 PTGFRNQ9P2B2 879 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 MFSD2BA6NFX1 497 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 FPGTO14772 594 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 F12P00748 615 aaPredicted RBP8.44□□□□□ -1.06
SF3B2-216ENST00000534765 APODP05090 189 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 BCKDHAP12694 445 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 SDC1P18827 310 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 S100A3P33764 101 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 RGS4P49798 205 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 C18orf63Q68DL7 685 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 ZNF367Q7RTV3 350 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 OR10G2Q8NGC3 310 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 PATE1Q8WXA2 126 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 ACOT12Q8WYK0 555 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 BMFQ96LC9 184 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 SLC38A2Q96QD8 506 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 TEX101Q9BY14 249 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 BARHL1Q9BZE3 327 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 OR10A4Q9H209 315 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 ASF1BQ9NVP2 202 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 RHCGQ9UBD6 479 aa8.44□□□□□ -1.06
SF3B2-216ENST00000534765 KCNMB2Q9Y691 235 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms