RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 BMP7P18075 431 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 ENDOUP21128 410 aaKnown RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 CSTF2P33240 577 aaKnown RBP eCLIP12.37□□□□□ -0.43
BEST1-208ENST00000534553 ZNF91Q05481 1191 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.37□□□□□ -0.43
BEST1-208ENST00000534553 SRSF5Q13243 272 aaKnown RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 CTF1Q16619 201 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 TIMM50Q3ZCQ8 353 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 ULK3Q6PHR2 472 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 BMP8AQ7Z5Y6 402 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 ZAR1Q86SH2 424 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 MAML2Q8IZL2 1156 aaPredicted RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 C17orf47Q8NEP4 570 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 OR4N2Q8NGD1 307 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 SLC2A12Q8TD20 617 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 DNAJA4Q8WW22 397 aaPredicted RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 CNOT9Q92600 299 aaKnown RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 PLEKHA8Q96JA3 519 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 LCORQ96JN0 433 aaPredicted RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 LRR1Q96L50 414 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 DCUN1D5Q9BTE7 237 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 TSSK6Q9BXA6 273 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 LRRN3Q9H3W5 708 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 EGLN3Q9H6Z9 239 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 EXOSC3Q9NQT5 275 aaKnown RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 MRPS18AQ9NVS2 196 aaKnown RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 RPS6KB2Q9UBS0 482 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 SLC6A14Q9UN76 642 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 U3KQA8 63 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 UNC119BA6NIH7 251 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 M0R129 80 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 PRKYO43930 277 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 BCAS1O75363 584 aaPredicted RBP12.36□□□□□ -0.43
BEST1-208ENST00000534553 LYPD3O95274 346 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 RPLP0P05388 317 aaKnown RBP12.36□□□□□ -0.43
BEST1-208ENST00000534553 CYC1P08574 325 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 HPGDP15428 266 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 GPR143P51810 404 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 COPZ1P61923 177 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
BEST1-208ENST00000534553 RAB40BQ12829 278 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 NSDHLQ15738 373 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 SYT14P1Q58G82 188 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 ACSM5Q6NUN0 579 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 PLA2G12AQ9BZM1 189 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 FN3KQ9H479 309 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 SIDT1Q9NXL6 827 aaKnown RBP12.36□□□□□ -0.43
BEST1-208ENST00000534553 ZNF223Q9UK11 482 aaPredicted RBP12.36□□□□□ -0.43
BEST1-208ENST00000534553 RARRES3Q9UL19 164 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 NTNG1Q9Y2I2 539 aa12.36□□□□□ -0.43
BEST1-208ENST00000534553 A0A1B0GWA3 101 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 SCDO00767 359 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 TO15178 435 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 HYAL3O43820 417 aaPredicted RBP12.35□□□□□ -0.43
BEST1-208ENST00000534553 ONECUT2O95948 504 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 IGF2P01344 180 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 LCKP06239 509 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 CKMT1AP12532 417 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 CD36P16671 472 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 ACAA2P42765 397 aaKnown RBP12.35□□□□□ -0.43
BEST1-208ENST00000534553 GPR4P46093 362 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 SERPINB10P48595 397 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 OCA2Q04671 838 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 C1DQ13901 141 aaKnown RBP12.35□□□□□ -0.43
BEST1-208ENST00000534553 COL9A2Q14055 689 aaPredicted RBP12.35□□□□□ -0.43
BEST1-208ENST00000534553 PGGHGQ32M88 737 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 KLHL26Q53HC5 615 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 ALG10BQ5I7T1 473 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 PERM1Q5SV97 790 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 HLA-DQA1Q5Y7H0 255 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 ZC3H14Q6PJT7 736 aaKnown RBP12.35□□□□□ -0.43
BEST1-208ENST00000534553 IQCF1Q8N6M8 205 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 PROKR2Q8NFJ6 384 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 ZNF721Q8TF20 911 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 FGF11Q92914 225 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 MND1Q9BWT6 205 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 SLC19A3Q9BZV2 496 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 OR8D2Q9GZM6 311 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 DNAJC27Q9NZQ0 273 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 DIMT1Q9UNQ2 313 aaKnown RBP12.35□□□□□ -0.43
BEST1-208ENST00000534553 BAIAP2Q9UQB8 552 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 NUP210LQ5VU65 1888 aa12.35□□□□□ -0.43
BEST1-208ENST00000534553 IGHV5-10-1A0A0J9YXX1 117 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 C2orf92A0A1B0GVN3 265 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 A0A1W2PQM1 296 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 KDM4EB2RXH2 506 aaPredicted RBP12.34□□□□□ -0.43
BEST1-208ENST00000534553 ARHGAP33O14559 1287 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 HCN1O60741 890 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 RAB36O95755 333 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 DDAH2O95865 285 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 IFI30P13284 250 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 MYF5P13349 255 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 GRK5P34947 590 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 TUBA1BP68363 451 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 CCL7P80098 99 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 PLAURQ03405 335 aa12.34□□□□□ -0.43
BEST1-208ENST00000534553 TRA2AQ13595 282 aaKnown RBP eCLIP12.34□□□□□ -0.43
BEST1-208ENST00000534553 ZNF528Q3MIS6 628 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms