RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FAM26EQ8N5C1 309 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 B4GALNT2Q8NHY0 566 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 TSPEARQ8WU66 669 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 SMPDL3BQ92485 455 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 CCDC120Q96HB5 630 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 TREX2Q9BQ50 279 aaPredicted RBP12.7□□□□□ -0.38
VPS11-205ENST00000534551 RSPO3Q9BXY4 272 aaPredicted RBP12.7□□□□□ -0.38
VPS11-205ENST00000534551 PIF1Q9H611 641 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 A4GALTQ9NPC4 353 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 MED17Q9NVC6 651 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 ALKBH4Q9NXW9 302 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 GMPR2Q9P2T1 348 aaKnown RBP12.7□□□□□ -0.38
VPS11-205ENST00000534551 ACAD8Q9UKU7 415 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 CAMK2AQ9UQM7 478 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 SLC5A6Q9Y289 635 aa12.7□□□□□ -0.38
VPS11-205ENST00000534551 OR2M5A3KFT3 312 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 OR14I1A6ND48 311 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 H3BML4 177 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 AP3D1O14617 1153 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 SHOX2O60902 331 aaPredicted RBP12.69□□□□□ -0.38
VPS11-205ENST00000534551 NUDT14O95848 222 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 CSTAP01040 98 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 COX4I1P13073 169 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 PGM1P36871 562 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 CPA2P48052 419 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 ADORA2A-AS1P86434 159 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 MAPRE2Q15555 327 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 ADRM1Q16186 407 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 RTL6Q6ICC9 239 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 PIGWQ7Z7B1 504 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 COMTD1Q86VU5 262 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 PTOV1Q86YD1 416 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 FAM71CQ8NEG0 241 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 POC1BQ8TC44 478 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 WDR60Q8WVS4 1066 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 CNOT9Q92600 299 aaKnown RBP12.69□□□□□ -0.38
VPS11-205ENST00000534551 ABTB1Q969K4 478 aaPredicted RBP12.69□□□□□ -0.38
VPS11-205ENST00000534551 SARAFQ96BY9 339 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 LRRC58Q96CX6 371 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 TIMP4Q99727 224 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 HOXD1Q9GZZ0 328 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 RAD21L1Q9H4I0 556 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 TMEM185BQ9H7F4 350 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 POLE3Q9NRF9 147 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 ICAM5Q9UMF0 924 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 LIPT1Q9Y234 373 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 MEMO1Q9Y316 297 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 FAM215AQ9Y5M1 114 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 ICE1Q9Y2F5 2266 aa12.69□□□□□ -0.38
VPS11-205ENST00000534551 LRRK2Q5S007 2527 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 UTP20O75691 2785 aaKnown RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 AGAP5A6NIR3 686 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 BBIP1A8MTZ0 92 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 GTPBP1O00178 669 aaKnown RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 BCKDKO14874 412 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 ZNF264O43296 627 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 SEC14L5O43304 696 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 CCDC22O60826 627 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 SOX30O94993 753 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 LDLRP01130 860 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 OPN1LWP04000 364 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 GPX2P18283 190 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 IL11P20809 199 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 SHC1P29353 583 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 LHX2P50458 406 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 CRISP3P54108 245 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 CLDN18P56856 261 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 TXNL4AP83876 142 aaKnown RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 SRYQ05066 204 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 CYLC2Q14093 348 aaPredicted RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 GANABQ14697 944 aaKnown RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 CDSNQ15517 529 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 CYP51A1Q16850 503 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 TMEM44Q2T9K0 475 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 MRPL2Q5T653 305 aaKnown RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 WLSQ5T9L3 541 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 VASNQ6EMK4 673 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 MTERF4Q7Z6M4 381 aaKnown RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 ZZZ3Q8IYH5 903 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 ULK2Q8IYT8 1036 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 UBQLNLQ8IYU4 475 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 WDYHV1Q96HA8 205 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 RNF145Q96MT1 663 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 DMRTA2Q96SC8 542 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 CCT8L2Q96SF2 557 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 PTGES2Q9H7Z7 377 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 RLIMQ9NVW2 624 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 DNAJB12Q9NXW2 375 aaKnown RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 ZNF443Q9Y2A4 671 aaPredicted RBP12.68□□□□□ -0.38
VPS11-205ENST00000534551 CHST2Q9Y4C5 530 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 GMEB1Q9Y692 573 aa12.68□□□□□ -0.38
VPS11-205ENST00000534551 INTS1Q8N201 2190 aaKnown RBP12.67□□□□□ -0.38
VPS11-205ENST00000534551 A1L4Q6 167 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 EVPLLA8MZ36 301 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 H3BNH8 94 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 AIM2O14862 343 aa12.67□□□□□ -0.38
VPS11-205ENST00000534551 SLC22A2O15244 555 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms