RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 LINC01560Q8TB33 94 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 MIPOL1Q8TD10 442 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 ADAMTS15Q8TE58 950 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 SH3YL1Q96HL8 342 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-215ENST00000534307 OR7D2Q96RA2 312 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 POLDIP3Q9BY77 421 aaKnown RBP12.63□□□□□ -0.39
SF3B2-215ENST00000534307 HOXD1Q9GZZ0 328 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 CLEC4MQ9H2X3 399 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-215ENST00000534307 ICAM5Q9UMF0 924 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 RTTNQ86VV8 2226 aa12.63□□□□□ -0.39
SF3B2-215ENST00000534307 CSPG4Q6UVK1 2322 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 NPIPA5A0A0B4J1W7 369 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 RNF103-CHMP3A0A140T963 221 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 NPIPA7E9PJI5 369 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 SDHDO14521 159 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 ADAMDEC1O15204 470 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 CFLARO15519 480 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 ALDOCP09972 364 aaKnown RBP12.62□□□□□ -0.39
SF3B2-215ENST00000534307 NPIPA8P0DM63 369 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 NID1P14543 1247 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 HPGDP15428 266 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 LBPP18428 481 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 ATP6V1C1P21283 382 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 SOAT1P35610 550 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 ATP12AP54707 1039 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 RAC1P63000 192 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 BHLHB9Q6PI77 547 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 ZNF474Q6S9Z5 364 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-215ENST00000534307 C6orf120Q7Z4R8 191 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 BTLAQ7Z6A9 289 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 CDC20BQ86Y33 519 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 CLEC4FQ8N1N0 589 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 CHDHQ8NE62 594 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-215ENST00000534307 SMPDL3BQ92485 455 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 ZNF524Q96C55 264 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 TLCD1Q96CP7 247 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 CHMP6Q96FZ7 201 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 RNF145Q96MT1 663 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 SDF2Q99470 211 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 DPY30Q9C005 99 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 NMUR2Q9GZQ4 415 aa12.62□□□□□ -0.39
SF3B2-215ENST00000534307 PRSS51A0A1B0GVH4 220 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 GOSR1O95249 250 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 NTN1O95631 604 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 IL11P20809 199 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 SLC6A8P48029 635 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 CPA2P48052 419 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 ZNF41P51814 821 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-215ENST00000534307 SUMO3P55854 103 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-215ENST00000534307 RPS3AP61247 264 aaKnown RBP12.61□□□□□ -0.39
SF3B2-215ENST00000534307 CASP8Q14790 479 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 SPANXN4Q5MJ08 99 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 HHATQ5VTY9 493 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 AP1ARQ63HQ0 302 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 HEPHL1Q6MZM0 1159 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 ANKRD46Q86W74 232 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 WDR75Q8IWA0 830 aaKnown RBP12.61□□□□□ -0.39
SF3B2-215ENST00000534307 CNEP1R1Q8N9A8 125 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 ZNF527Q8NB42 609 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 OR10D3Q8NH80 312 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 PHOSPHO1Q8TCT1 267 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 NINJ1Q92982 152 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 TEX37Q96LM6 180 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 DACH2Q96NX9 599 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 PAIP2Q9BPZ3 127 aaKnown RBP12.61□□□□□ -0.39
SF3B2-215ENST00000534307 LIME1Q9H400 295 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 THAP1Q9NVV9 213 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 KCNE5Q9UJ90 142 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 DTNAQ9Y4J8 743 aa12.61□□□□□ -0.39
SF3B2-215ENST00000534307 FN1P02751 2386 aaKnown RBP12.61□□□□□ -0.39
SF3B2-215ENST00000534307 COL6A5A8TX70 2615 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 A0A0J9YW62 118 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 CENPVL1A0A0U1RR11 272 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 DUXAA6NLW8 204 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 E9PBE3 544 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 ETV2O00321 342 aaPredicted RBP12.6□□□□□ -0.39
SF3B2-215ENST00000534307 EIF1AYO14602 144 aaKnown RBP12.6□□□□□ -0.39
SF3B2-215ENST00000534307 EFNA2O43921 213 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 FCMRO60667 390 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 DNAJA2O60884 412 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 CD8BP10966 210 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 FCGR2AP12318 317 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 MATN1P21941 496 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 ELK4P28324 431 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 SHC1P29353 583 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 CCKARP32238 428 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 EIF1P41567 113 aaKnown RBP12.6□□□□□ -0.39
SF3B2-215ENST00000534307 EIF1AXP47813 144 aaKnown RBP12.6□□□□□ -0.39
SF3B2-215ENST00000534307 RNF144AP50876 292 aaPredicted RBP12.6□□□□□ -0.39
SF3B2-215ENST00000534307 P2RX1P51575 399 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 IST1P53990 364 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 MAGOHP61326 146 aaKnown RBP12.6□□□□□ -0.39
SF3B2-215ENST00000534307 FAM27E3Q08E93 113 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 FOXF1Q12946 379 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 ZNF141Q15928 474 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 DPY19L1Q2PZI1 675 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 NDUFAF6Q330K2 333 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 ARHGAP11BQ3KRB8 267 aa12.6□□□□□ -0.39
SF3B2-215ENST00000534307 ANXA8L1Q5VT79 327 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms