RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 TMEM107Q6UX40 140 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 ZNF704Q6ZNC4 412 aaPredicted RBP9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 C6orf120Q7Z4R8 191 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 CBR4Q8N4T8 237 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 DHRSXQ8N5I4 330 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 CDRT4Q8N9R6 151 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 NUP43Q8NFH3 380 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 B3GNT7Q8NFL0 401 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 OR52E4Q8NGH9 312 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 PHF10Q8WUB8 498 aaKnown RBP9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 POP5Q969H6 163 aaKnown RBP9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 SLC35G5Q96KT7 338 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 C9orf16Q9BUW7 83 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 BTBD2Q9BX70 525 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 ACTRT3Q9BYD9 372 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 DUSP22Q9NRW4 184 aa9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.53□□□□□ -0.88
CAPRIN1-215ENST00000533657 NME4O00746 187 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 TBX1O43435 398 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 NKX2-2O95096 273 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 AK1P00568 194 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 IFI30P13284 250 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 HTR1EP28566 365 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 LCN1P31025 176 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 POLR2IP36954 125 aaKnown RBP9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 CAPGP40121 348 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 SLC37A1P57057 533 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 ID2Q02363 134 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 RGNQ15493 299 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 GTDC1Q4AE62 458 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 HEPHL1Q6MZM0 1159 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 FAM111BQ6SJ93 734 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 NDUFAF7Q7L592 441 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 MARCH9Q86YJ5 346 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 ZNF441Q8N8Z8 693 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 SLC2A12Q8TD20 617 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 MARC2Q969Z3 335 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 VSTM2LQ96N03 204 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 LPAR4Q99677 370 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 SCNM1Q9BWG6 230 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 ZNF556Q9HAH1 456 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 MMP25Q9NPA2 562 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 POLE3Q9NRF9 147 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 ZCCHC3Q9NUD5 404 aaKnown RBP9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 ADA2Q9NZK5 511 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 SPTBP11277 2137 aa9.52□□□□□ -0.88
CAPRIN1-215ENST00000533657 DUXAA6NLW8 204 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 TO15178 435 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 ZNF780AO75290 641 aaPredicted RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 IL7P13232 177 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 SPNP16150 400 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 CHI3L1P36222 383 aaPredicted RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 YAP1P46937 504 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 EMDP50402 254 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 SLC26A5P58743 744 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 MRPL28Q13084 256 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 CLN3Q13286 438 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 SPDYE7PQ495Y7 208 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 PLAG1Q6DJT9 500 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 LANCL3Q6ZV70 420 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 UBQLNLQ8IYU4 475 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 CHDHQ8NE62 594 aaPredicted RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 NUBPLQ8TB37 319 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 ELP5Q8TE02 316 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 DUS3LQ96G46 650 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 ST6GAL2Q96JF0 529 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 WDR70Q9NW82 654 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 EIF3KQ9UBQ5 218 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 BAG5Q9UL15 447 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 CLCA3PQ9Y6N3 262 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 PMF1-BGLAPU3KQ54 211 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 EXPH5Q8NEV8 1989 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 CREG1O75629 220 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 SOAT1P35610 550 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 ARHGDIAP52565 204 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 SLC7A2P52569 658 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 EEF1A2Q05639 463 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 DBPQ10586 325 aaPredicted RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 CHAF1BQ13112 559 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 VEZF1Q14119 521 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 CAPRIN1Q14444 709 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 IRAK1BP1Q5VVH5 260 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 XAF1Q6GPH4 301 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 HMBOX1Q6NT76 420 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 OFCC1Q8IZS5 231 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 SENP5Q96HI0 755 aaPredicted RBP9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 WACQ9BTA9 647 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 OR10A5Q9H207 317 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 DSN1Q9H410 356 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 PIGUQ9H490 435 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 IKZF5Q9H5V7 419 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 COPS7AQ9UBW8 275 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 LIPT1Q9Y234 373 aa9.52□□□□□ -0.89
CAPRIN1-215ENST00000533657 AGRPO00253 132 aa9.51□□□□□ -0.89
CAPRIN1-215ENST00000533657 CLIC3O95833 236 aa9.51□□□□□ -0.89
CAPRIN1-215ENST00000533657 ARAFP10398 606 aa9.51□□□□□ -0.89
CAPRIN1-215ENST00000533657 DRD5P21918 477 aa9.51□□□□□ -0.89
CAPRIN1-215ENST00000533657 F8A1P23610 371 aa9.51□□□□□ -0.89
CAPRIN1-215ENST00000533657 PCGF2P35227 344 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms