RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 KIAA1549Q9HCM3 1950 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 A0A096LPI6 279 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 MBD3L4A6NDZ8 208 aaPredicted RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 MBD3L3A6NE82 208 aaPredicted RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 SERINC4A6NH21 518 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 MBD3L5A6NJ08 208 aaPredicted RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 PRSS44E7EML9 344 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 NR5A2O00482 541 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 GMFGO60234 142 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 TROVE2P10155 538 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCS-208ENST00000533244 PEPDP12955 493 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 PSMA4P25789 261 aaKnown RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 HTR1EP28566 365 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 GRNP28799 593 aaKnown RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 CEACAM8P31997 349 aaPredicted RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 TIMP3P35625 211 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 MDH1P40925 334 aaKnown RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 MAPK11Q15759 364 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 MAPK14Q16539 360 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 CCDC71Q8IV32 467 aaPredicted RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 ZNF619Q8N2I2 560 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 GTPBP8Q8N3Z3 284 aaPredicted RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 ANKFN1Q8N957 763 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 OR5M1Q8NGP8 315 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 MBD3L2Q8NHZ7 208 aaPredicted RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 CA5BP1Q8WTZ4 195 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 ZBTB8AQ96BR9 441 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 AURKBQ96GD4 344 aaPredicted RBP18.48■□□□□ 0.55
CCS-208ENST00000533244 TMEM120AQ9BXJ8 343 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 SLC38A1Q9H2H9 487 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 CALHM2Q9HA72 323 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 VDAC3Q9Y277 283 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 CARD8Q9Y2G2 431 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 L3MBTL1Q9Y468 752 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 GMEB1Q9Y692 573 aa18.48■□□□□ 0.55
CCS-208ENST00000533244 H0Y3Z8 333 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 EIF4E2O60573 245 aaKnown RBP18.47■□□□□ 0.55
CCS-208ENST00000533244 H6PDO95479 791 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 CHRM4P08173 479 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 LINGO3P0C6S8 592 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 NCF2P19878 526 aaPredicted RBP18.47■□□□□ 0.55
CCS-208ENST00000533244 RNF144AP50876 292 aaPredicted RBP18.47■□□□□ 0.55
CCS-208ENST00000533244 P2RX1P51575 399 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 CLDN15P56746 228 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 CHRNEQ04844 493 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 SYPL1Q16563 259 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 GPAT3Q53EU6 434 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 PAGE3Q5JUK9 113 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 LRRC74BQ6ZQY2 392 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 MSRB3Q8IXL7 192 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 ZNF614Q8N883 585 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 FAM71CQ8NEG0 241 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 ARSGQ96EG1 525 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 NPAS1Q99742 590 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 SLC25A37Q9NYZ2 338 aa18.47■□□□□ 0.55
CCS-208ENST00000533244 TRBV5-3A0A0A0MS03 114 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 A0A1W2PP18 115 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 SHISA8B8ZZ34 492 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 ZNF264O43296 627 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 DNAJA2O60884 412 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 VIMP08670 466 aaKnown RBP18.46■□□□□ 0.55
CCS-208ENST00000533244 UBL4AP11441 157 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 ETFAP13804 333 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 POU3F2P20265 443 aaPredicted RBP18.46■□□□□ 0.55
CCS-208ENST00000533244 ZNF41P51814 821 aaPredicted RBP18.46■□□□□ 0.55
CCS-208ENST00000533244 SKP2Q13309 424 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 FGFBP1Q14512 234 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 NDUFAF6Q330K2 333 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 NAXEQ8NCW5 288 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 TOR1AIP2Q8NFQ8 470 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 TNIP2Q8NFZ5 429 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 OR10Q1Q8NGQ4 319 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 POC1BQ8TC44 478 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 ZG16BQ96DA0 208 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 ZNF317Q96PQ6 595 aaPredicted RBP18.46■□□□□ 0.55
CCS-208ENST00000533244 TRIB1Q96RU8 372 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 RUBCNLQ9H714 662 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 SLAMF8Q9P0V8 285 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 CLCF1Q9UBD9 225 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 AP4B1Q9Y6B7 739 aa18.46■□□□□ 0.55
CCS-208ENST00000533244 CLCA1A8K7I4 914 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 GTPBP1O00178 669 aaKnown RBP18.45■□□□□ 0.54
CCS-208ENST00000533244 ETV2O00321 342 aaPredicted RBP18.45■□□□□ 0.54
CCS-208ENST00000533244 BMP2P12643 396 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 HPCAP84074 193 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 PLAURQ03405 335 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 SRYQ05066 204 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 LIX1LQ8IVB5 337 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 GPR119Q8TDV5 335 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 TSPEARQ8WU66 669 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 PMM1Q92871 262 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 LAT2Q9GZY6 243 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 CHST11Q9NPF2 352 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 P2RX2Q9UBL9 471 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 DOCK7Q96N67 2140 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 ADGRG4Q8IZF6 3080 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 CENPEQ02224 2701 aa18.45■□□□□ 0.54
CCS-208ENST00000533244 DSPPQ9NZW4 1301 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 HSPB2A8KAH6 182 aa18.44■□□□□ 0.54
CCS-208ENST00000533244 H3BML4 177 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms