RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 FAM120BQ96EK7 910 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 RASL10BQ96S79 203 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 KCTD14Q9BQ13 255 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 ALOXE3Q9BYJ1 711 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 PCDHAC1Q9H158 963 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 DENND2DQ9H6A0 471 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 KAT8Q9H7Z6 458 aaKnown RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 ACKR4Q9NPB9 350 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 NECTIN3Q9NQS3 549 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 TUBA8Q9NY65 449 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 NDRG3Q9UGV2 375 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 ZNF223Q9UK11 482 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 USP22Q9UPT9 525 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 NPFFR2Q9Y5X5 522 aa10.29□□□□□ -0.76
TRAPPC4-213ENST00000533149 RNF103-CHMP3A0A140T963 221 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 TGFBR3LH3BV60 316 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 ACOT8O14734 319 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 EMC8O43402 210 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 TLX2O43763 284 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 DNAJA2O60884 412 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 NT5EP21589 574 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 DNASE1L1P49184 302 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 PTH2RP49190 550 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 MVDP53602 400 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 CASP9P55211 416 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 IGLV3-21P80748 117 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 STX4Q12846 297 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 TRAP1Q12931 704 aaKnown RBP10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 RGNQ15493 299 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 CHRFAM7AQ494W8 412 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 COX20Q5RI15 118 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 C6orf163Q5TEZ5 329 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 SAXO2Q658L1 398 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 FAM111BQ6SJ93 734 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 TMEM107Q6UX40 140 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 TMEM64Q6YI46 380 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 PM20D2Q8IYS1 436 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 NEIL3Q8TAT5 605 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 NCLNQ969V3 563 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 NTNG2Q96CW9 530 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 NEURL3Q96EH8 262 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 RBM24Q9BX46 236 aaKnown RBP10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 RAD21L1Q9H4I0 556 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 ALG2Q9H553 416 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 UBTD1Q9HAC8 227 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 C3orf14Q9HBI5 128 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 GPATCH2Q9NW75 528 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 QPCTLQ9NXS2 382 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 MMACHCQ9Y4U1 282 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 CLDN16Q9Y5I7 305 aa10.28□□□□□ -0.76
TRAPPC4-213ENST00000533149 WWP2O00308 870 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 PLOD2O00469 737 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR10H2O60403 315 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 BCAS2O75934 225 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 MC3RP41968 323 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 CRATP43155 626 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 GPR143P51810 404 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 PRKAG1P54619 331 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 MGAT2Q10469 447 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 BNIP2Q12982 314 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 BIKQ13323 160 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 SERTAD2Q14140 314 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZNF628Q5EBL2 1059 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 NSUN5P2Q63ZY6 315 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 OPN5Q6U736 354 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 ANGPTL8Q6UXH0 198 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 DGAT2L6Q6ZPD8 337 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 DHFR2Q86XF0 187 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 RNF130Q86XS8 419 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 MICU2Q8IYU8 434 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 MEIOBQ8N635 442 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR2T12Q8NG77 320 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR7G2Q8NG99 324 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 SFXN5Q8TD22 340 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 MOAP1Q96BY2 351 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 RBM18Q96H35 190 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 DGAT2Q96PD7 388 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZNF703Q9H7S9 590 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 ANKRA2Q9H9E1 313 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 LIN28AQ9H9Z2 209 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 PNO1Q9NRX1 252 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZCCHC3Q9NUD5 404 aaKnown RBP10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 EGFL7Q9UHF1 273 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 BOKQ9UMX3 212 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 CORO2BQ9UQ03 480 aa10.27□□□□□ -0.77
TRAPPC4-213ENST00000533149 ELOVL7A1L3X0 281 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 CD8B2A6NJW9 211 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 FAM220BPB1ANY3 271 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 UPK1AO00322 258 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 GSTA4O15217 222 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 PRKNO60260 465 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 IFNA16P05015 189 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 ATP1B1P05026 303 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 NUDT7P0C024 238 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 ETFAP13804 333 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 PAX1P15863 534 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 TNNI3P19429 210 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 SOX18P35713 384 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms