RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 C16orf58Q96GQ5 468 aa11.55□□□□□ -0.56
COPB1-209ENST00000533096 EGLN2Q96KS0 407 aa11.55□□□□□ -0.56
COPB1-209ENST00000533096 ZNF382Q96SR6 550 aa11.55□□□□□ -0.56
COPB1-209ENST00000533096 CHODLQ9H9P2 273 aa11.55□□□□□ -0.56
COPB1-209ENST00000533096 TMEM216Q9P0N5 145 aa11.55□□□□□ -0.56
COPB1-209ENST00000533096 KLHL13Q9P2N7 655 aa11.55□□□□□ -0.56
COPB1-209ENST00000533096 A0A1W2PNR3 127 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 A0A1W2PR80 420 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 CCDC151A5D8V7 595 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 E7EQL1 145 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 GTPBP1O00178 669 aaKnown RBP11.54□□□□□ -0.56
COPB1-209ENST00000533096 AKAP10O43572 662 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 LMX1BO60663 402 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 CRCPO75575 148 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 THBS1P07996 1170 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 TTKP33981 857 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 SERPINB9P50453 376 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 FABP6P51161 128 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 DSCR9P59020 149 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 FOXF1Q12946 379 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 ZNF239Q16600 458 aaKnown RBP11.54□□□□□ -0.56
COPB1-209ENST00000533096 VPS26BQ4G0F5 336 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 GALNT18Q6P9A2 607 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 ZNF100Q8IYN0 542 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 FBXL14Q8N1E6 418 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 UBE2J2Q8N2K1 259 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 SLC16A11Q8NCK7 471 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 NUP43Q8NFH3 380 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 OR52N5Q8NH56 324 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 CEP70Q8NHQ1 597 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 ACTRT2Q8TDY3 377 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 RNF128Q8TEB7 428 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 FAM168AQ92567 244 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 CPNE4Q96A23 557 aaPredicted RBP11.54□□□□□ -0.56
COPB1-209ENST00000533096 CIDECQ96AQ7 238 aaPredicted RBP11.54□□□□□ -0.56
COPB1-209ENST00000533096 TMEM237Q96Q45 408 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 PAFAH2Q99487 392 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 C1QTNF3Q9BXJ4 246 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 POTEKPQ9BYX7 375 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 MID1IP1Q9NPA3 183 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 UBQLN4Q9NRR5 601 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 GIN1Q9NXP7 522 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 TAS2R7Q9NYW3 318 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 CARD8Q9Y2G2 431 aa11.54□□□□□ -0.56
COPB1-209ENST00000533096 SEC22BO75396 215 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 LY6HO94772 140 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 SLITRK5O94991 958 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 KCNK2O95069 426 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 NKX2-2O95096 273 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 PSMG1O95456 288 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 IGHV3-9P01782 118 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 ALOX5P09917 674 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 LINGO3P0C6S8 592 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 ACP2P11117 423 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 ZNF16P17020 682 aaPredicted RBP11.53□□□□□ -0.56
COPB1-209ENST00000533096 SRD5A1P18405 259 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 GGT1P19440 569 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 EFNA1P20827 205 aaPredicted RBP11.53□□□□□ -0.56
COPB1-209ENST00000533096 EDNRAP25101 427 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 EIF1P41567 113 aaKnown RBP11.53□□□□□ -0.56
COPB1-209ENST00000533096 FOXA1P55317 472 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 LOXL1Q08397 574 aaPredicted RBP11.53□□□□□ -0.56
COPB1-209ENST00000533096 CD226Q15762 336 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 DUSP5Q16690 384 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 NOXRED1Q6NXP6 359 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 Q6ZSR9 355 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 DTX2Q86UW9 622 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 CDRT4Q8N9R6 151 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 JADE3Q92613 823 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 C3orf49Q96BT1 292 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
COPB1-209ENST00000533096 CXorf36Q9H7Y0 433 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 HHATLQ9HCP6 504 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 SH3BP4Q9P0V3 963 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 LPAR3Q9UBY5 353 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 CHD3Q12873 2000 aaKnown RBP11.53□□□□□ -0.56
COPB1-209ENST00000533096 ROS1P08922 2347 aa11.53□□□□□ -0.56
COPB1-209ENST00000533096 SONP18583 2426 aaKnown RBP11.52□□□□□ -0.56
COPB1-209ENST00000533096 NPIPA5A0A0B4J1W7 369 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 CIB4A0PJX0 185 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 C7orf72A4D263 438 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 TTC36A6NLP5 189 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 CCT8L1PA6NM43 557 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 GJE1A6NN92 205 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 NPIPA7E9PJI5 369 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 M0R1B8 84 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 OIP5O43482 229 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 ENO1P06733 434 aaKnown RBP11.52□□□□□ -0.57
COPB1-209ENST00000533096 GSTA1P08263 222 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 SNRPAP09012 282 aaKnown RBP11.52□□□□□ -0.57
COPB1-209ENST00000533096 NPIPA8P0DM63 369 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 USF1P22415 310 aaPredicted RBP11.52□□□□□ -0.57
COPB1-209ENST00000533096 IGHV1-2P23083 117 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 SLC7A1P30825 629 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 CASQ1P31415 396 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 GSTM5P46439 218 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
COPB1-209ENST00000533096 VLDLRP98155 873 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 RASGEF1BQ0VAM2 473 aa11.52□□□□□ -0.57
COPB1-209ENST00000533096 LCP2Q13094 533 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms