RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ZNF41P51814 821 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-210ENST00000532935 POLR2JP52435 117 aaKnown RBP13.87□□□□□ -0.19
CPSF1-210ENST00000532935 AQP5P55064 265 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 CLDN15P56746 228 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF117Q03924 483 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 GPR68Q15743 365 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 PLPPR5Q32ZL2 321 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 POMZP3Q6PJE2 187 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 PLXDC2Q6UX71 529 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF621Q6ZSS3 439 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 OLIG3Q7RTU3 272 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 GTPBP8Q8N3Z3 284 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-210ENST00000532935 MEIOBQ8N635 442 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF614Q8N883 585 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 SMPDL3BQ92485 455 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 RAB8BQ92930 207 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 WNT2BQ93097 391 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 ZBTB8AQ96BR9 441 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 TM9SF2Q99805 663 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 KLHDC3Q9BQ90 382 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 EBF4Q9BQW3 602 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 CCDC28BQ9BUN5 200 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 TRIM8Q9BZR9 551 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF629Q9UEG4 869 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-210ENST00000532935 MKLN1Q9UL63 735 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 CARD8Q9Y2G2 431 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 AP4B1Q9Y6B7 739 aa13.87□□□□□ -0.19
CPSF1-210ENST00000532935 CSMD1Q96PZ7 3565 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 FAM234BA2RU67 622 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 C7orf72A4D263 438 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 H0YC42 278 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 GTPBP1O00178 669 aaKnown RBP13.86□□□□□ -0.19
CPSF1-210ENST00000532935 SEC14L5O43304 696 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 OIP5O43482 229 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 TNFRSF21O75509 655 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 RCBTB2O95199 551 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 GUSBP08236 651 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 TMIGD3P0DMS9 266 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-210ENST00000532935 P2RX1P51575 399 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 SUCLG1P53597 346 aaKnown RBP13.86□□□□□ -0.19
CPSF1-210ENST00000532935 GYS2P54840 703 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 TPD52P55327 224 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-210ENST00000532935 CLDN20P56880 219 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 EEFSECP57772 596 aaKnown RBP13.86□□□□□ -0.19
CPSF1-210ENST00000532935 FUT5Q11128 374 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF141Q15928 474 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 TIGD2Q4W5G0 525 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 PDZK1Q5T2W1 519 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 CBLN3Q6UW01 205 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 MSANTD1Q6ZTZ1 278 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 CHMP1BQ7LBR1 199 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 RNF130Q86XS8 419 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 GRAMD2AQ8IUY3 354 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 ROPN1LQ96C74 230 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 ZFP3Q96NJ6 502 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 NPAS1Q99742 590 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 KCNE5Q9UJ90 142 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 ICAM5Q9UMF0 924 aa13.86□□□□□ -0.19
CPSF1-210ENST00000532935 CENPVL1A0A0U1RR11 272 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 SERINC4A6NH21 518 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 HMGN4O00479 90 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 KIAA0513O60268 411 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 UGT2B17O75795 530 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 TGM6O95932 706 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 IL18BPO95998 194 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 LINGO3P0C6S8 592 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 OPRM1P35372 400 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 MRPL19P49406 292 aaKnown RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 ANXA11P50995 505 aaKnown RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 AGFG1P52594 562 aaKnown RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 SUMO3P55854 103 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 STX1BP61266 288 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 TXNL4AP83876 142 aaKnown RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 NDUFAF6Q330K2 333 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 TYW3Q6IPR3 259 aaKnown RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 DNAJC14Q6Y2X3 702 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 P4HA3Q7Z4N8 544 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 GDF7Q7Z4P5 450 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 DMRTC2Q8IXT2 367 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF295-AS1Q8N0V1 137 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 POC1BQ8TC44 478 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 PNPT1Q8TCS8 783 aaKnown RBP13.85□□□□□ -0.19
CPSF1-210ENST00000532935 VPS33AQ96AX1 596 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 ITCHQ96J02 903 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 RNF145Q96MT1 663 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 CCDC134Q9H6E4 229 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 RMND5AQ9H871 391 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 POLE3Q9NRF9 147 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 SLC6A13Q9NSD5 602 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 STOML1Q9UBI4 398 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 WDR45Q9Y484 360 aa13.85□□□□□ -0.19
CPSF1-210ENST00000532935 ANKHD1Q8IWZ3 2542 aaKnown RBP13.84□□□□□ -0.19
CPSF1-210ENST00000532935 PRAMEF27A3QJZ7 478 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 SLC22A20A6NK97 555 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 ZNF264O43296 627 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 EIF4E2O60573 245 aaKnown RBP13.84□□□□□ -0.19
CPSF1-210ENST00000532935 KRT75O95678 551 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 NUDT14O95848 222 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 UBL4AP11441 157 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 PSMA4P25789 261 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms