RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 CTHP32929 405 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 CCR6P51684 374 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 NKX6-1P78426 367 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SERINC3Q13530 473 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 NAE1Q13564 534 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 DYRK1AQ13627 763 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 GINS1Q14691 196 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OR4D1Q15615 310 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 PTCHD3Q3KNS1 767 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 FAM74A3Q4VXF1 159 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 RFTN2Q52LD8 501 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 FRMPD2BQ6IN97 320 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 QSOX2Q6ZRP7 698 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TMED4Q7Z7H5 227 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 MFSD6LQ8IWD5 586 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 PAQR8Q8TEZ7 354 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SNX33Q8WV41 574 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ZC3HAV1LQ96H79 300 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 LRR1Q96L50 414 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF607Q96SK3 696 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 AARSD1Q9BTE6 412 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 DUSP26Q9BV47 211 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 GABARAPL1Q9H0R8 117 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ZFYVE1Q9HBF4 777 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM248Q9NWD8 314 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 FKBPLQ9UIM3 349 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 PCDHB11Q9Y5F2 797 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 CDH10Q9Y6N8 788 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 NINQ8N4C6 2090 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 LCTP09848 1927 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 A0A0D9SG52 128 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 C5orf51A6NDU8 294 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 MFSD2BA6NFX1 497 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 GMFGO60234 142 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 CDC40O60508 579 aaKnown RBP eCLIP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SNRNP70P08621 437 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SBK3P0C264 359 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 GKN3PP0CG01 181 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 CTSEP14091 401 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 RBMS1P29558 406 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ASMTP46597 345 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 HTR6P50406 440 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 PPT1P50897 306 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 CDKN2DP55273 166 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 CLDN8P56748 225 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OC90Q02509 493 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SP140Q13342 867 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 P2RY14Q15391 338 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OTUD1Q5VV17 481 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 C18orf63Q68DL7 685 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 CLEC9AQ6UXN8 241 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OR10H4Q8NGA5 316 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OR10H5Q8NGA6 315 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OR52L1Q8NGH7 329 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SP7Q8TDD2 431 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 UBXN10Q96LJ8 280 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 C1orf74Q96LT6 269 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 PITX2Q99697 317 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 DPH2Q9BQC3 489 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 BCL2L14Q9BZR8 327 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ZCCHC2Q9C0B9 1178 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 RHCGQ9UBD6 479 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF282Q9UDV7 671 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 MAP4K5Q9Y4K4 846 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SEC16AO15027 2179 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ABCA7Q8IZY2 2146 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM265A0A087WTH1 108 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 MEIKINA0A087WXM9 373 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RPS10-NUDT3A0A1W2PQS6 291 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 AGAP14A8MT82 685 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 OR7A17O14581 309 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 IMPA2O14732 288 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 FLRT2O43155 660 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RAD1O60671 282 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CSO75390 466 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 POP4O95707 220 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 NQO2P16083 231 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 EPORP19235 508 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 PAX6P26367 422 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RPS10P46783 165 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CEBPGP53567 150 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 METAP1P53582 386 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 DLEU7Q6UYE1 221 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 TFAP2EQ6VUC0 442 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC36A4Q6YBV0 504 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SIAH3Q8IW03 269 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 REPS1Q96D71 796 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 NTMT1Q9BV86 223 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 EBPLQ9BY08 206 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SEMA4CQ9C0C4 833 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SUV39H2Q9H5I1 410 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 POPDC3Q9HBV1 291 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 NOX3Q9HBY0 568 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 TNFRSF12AQ9NP84 129 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 DLL4Q9NR61 685 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 EXO1Q9UQ84 846 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 PIEZO1Q92508 2521 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM72A0PK05 275 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 NCR1O76036 304 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 ADAP00813 363 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms