RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RAP1BP61224 184 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 RAP1AP62834 184 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 CHRNEQ04844 493 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 PIGFQ07326 219 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 CDK10Q15131 360 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 TMEM69Q5SWH9 247 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 XKR5Q6UX68 686 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 RSC1A1Q92681 617 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 UCKL1Q9NWZ5 548 aa10.59□□□□□ -0.71
PTPRK-221ENST00000532331 NPIPA5A0A0B4J1W7 369 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 NPIPA7E9PJI5 369 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 AIFM1O95831 613 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 NPIPA8P0DM63 369 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 OSMP13725 252 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 FOXA1P55317 472 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 APOFQ13790 326 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 MLC1Q15049 377 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 GTDC1Q4AE62 458 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 RPS26P11Q5JNZ5 115 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 LAIR1Q6GTX8 287 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SLC25A25Q6KCM7 469 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 TSPYL5Q86VY4 417 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 KIAA1958Q8N8K9 716 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF707Q96C28 371 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CCDC74BQ96LY2 380 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 OR4K3Q96R72 315 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PINK1Q9BXM7 581 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CDCP1Q9H5V8 836 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PCDHGA7Q9Y5G6 932 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PCDHA9Q9Y5H5 950 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 A0A1W2PPK0 400 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 VNN2O95498 520 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 OPN1LWP04000 364 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 GTF2F2P13984 249 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF182P17025 639 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SDC1P18827 310 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PCGF2P35227 344 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 MTNR1AP48039 350 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 FXYD6P3P58550 94 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SELENOWP63302 87 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 REEP5Q00765 189 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SEMA3BQ13214 749 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 TMEM236Q5W0B7 351 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 C3orf33Q6P1S2 294 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 MMP21Q8N119 569 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 LKAAEAR1Q8TD35 194 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CASTOR1Q8WTX7 329 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 AKAP1Q92667 903 aaKnown RBP eCLIP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SPTSSAQ969W0 71 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CREB3L1Q96BA8 519 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 WDR83Q9BRX9 315 aaKnown RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 C1QTNF2Q9BXJ5 285 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 KCNIP3Q9Y2W7 256 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SIPA1L3O60292 1781 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PLSCR5A0PG75 271 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 MRPL33O75394 65 aaKnown RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 OR7A10O76100 309 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CPOXP36551 454 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CSNK1A1P48729 337 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PGFP49763 221 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 HLCSP50747 726 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PRPS1P60891 318 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 VEZF1Q14119 521 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 KCNAB1Q14722 419 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PIP5KL1Q5T9C9 394 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 MS4A15Q8N5U1 240 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 ABHD5Q8WTS1 349 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 ACPTQ9BZG2 426 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 OR10A4Q9H209 315 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF701Q9NV72 531 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 STUB1Q9UNE7 303 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 OGFRL1Q5TC84 451 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 C22orf42Q6IC83 251 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PLBD1Q6P4A8 553 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SYCE2Q6PIF2 218 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 ZNF578Q96N58 590 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PAK1IP1Q9NWT1 392 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 GSKIPQ9P0R6 139 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PRRG2O14669 202 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SNAPC5O75971 98 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 NDUFB2O95178 105 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CDKN2CP42773 168 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 ETV4P43268 484 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 MICAQ29983 383 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 PAGE3Q5JUK9 113 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CPZQ66K79 652 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 HDHD5Q9BXW7 423 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 SLC6A16Q9GZN6 736 aa10.58□□□□□ -0.72
PTPRK-221ENST00000532331 TMEM184BQ9Y519 407 aaPredicted RBP10.58□□□□□ -0.72
PTPRK-221ENST00000532331 CD8B2A6NJW9 211 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 G3V3Y1 287 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 SMAD9O15198 467 aaKnown RBP10.57□□□□□ -0.72
PTPRK-221ENST00000532331 GKN3PP0CG01 181 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 CD8BP10966 210 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 LHCGRP22888 699 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 GK3PQ14409 553 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 AGBL4Q5VU57 503 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 AGAP7PQ5VUJ5 663 aa10.57□□□□□ -0.72
PTPRK-221ENST00000532331 OR9K2Q8NGE7 335 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms