RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 NTSP30990 170 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 UQCRFS1P47985 274 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 RPL14P50914 215 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 NCBP2P52298 156 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 CDH15P55291 814 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 PMP22Q01453 160 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 DUSP2Q05923 314 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 BST1Q10588 318 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 SF3A3Q12874 501 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 CBX3Q13185 183 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 MRPL49Q13405 166 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 EXOSC7Q15024 291 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 LTB4RQ15722 352 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 NKPD1Q17RQ9 610 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 TRMT12Q53H54 448 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF628Q5EBL2 1059 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 XKR7Q5GH72 579 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 C6orf136Q5SQH8 315 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 AGBL2Q5U5Z8 902 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 FAM71E1Q6IPT2 247 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 MTFR2Q6P444 385 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 WDR73Q6P4I2 378 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 FAM111BQ6SJ93 734 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 CXXC5Q7LFL8 322 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 MDGA2Q7Z553 956 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 FAM9CQ8IZT9 166 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF781Q8N8C0 355 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF615Q8N8J6 731 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 FNDC5Q8NAU1 212 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 ST6GALNAC3Q8NDV1 305 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 PSD4Q8NDX1 1056 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 Q8NFD4 153 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 TNIP2Q8NFZ5 429 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR52R1Q8NGF1 315 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 OR9A2Q8NGT5 310 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 NR4A3Q92570 626 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 GFM2Q969S9 779 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 TP53INP1Q96A56 240 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 TUBGCP3Q96CW5 907 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 EGLN2Q96KS0 407 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 FCRL1Q96LA6 429 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 CMTM3Q96MX0 182 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 TSSK3Q96PN8 268 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 BBS4Q96RK4 519 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLX1AQ9BQ83 275 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 SPATA5L1Q9BVQ7 753 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 C20orf27Q9GZN8 174 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 REEP4Q9H6H4 257 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 OPA3Q9H6K4 179 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 VIPAS39Q9H9C1 493 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 GPR35Q9HC97 309 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 SIRT3Q9NTG7 399 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 TAS2R7Q9NYW3 318 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 COQ3Q9NZJ6 369 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 MAT2BQ9NZL9 334 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 FBLN5Q9UBX5 448 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 PRODH2Q9UF12 536 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 BAIAP2L1Q9UHR4 511 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF639Q9UID6 485 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 EXO1Q9UQ84 846 aaKnown RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 CFL2Q9Y281 166 aa5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 KLF13Q9Y2Y9 288 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P42-201ENST00000532126 hCG_1809904A0A1W2PP81 198 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 A0A1W2PPE2 198 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 A0A1W2PR64 198 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ASPDHA6ND91 283 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 CAPN14A8MX76 684 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 NPIPA5E9PKD4 350 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 PEX1O43933 1283 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF354AO60765 605 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 SLC43A1O75387 559 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 LRATO95237 230 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 NADKO95544 446 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 P04436 131 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 JUNP05412 331 aaKnown RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 GAAP10253 952 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 PRPS2P11908 318 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF24P17028 368 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 S1PR1P21453 382 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 GPX3P22352 226 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 PTAFRP25105 342 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 MSX2P35548 267 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 HPCAL1P37235 193 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 RPL3P39023 403 aaKnown RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ASMTP46597 345 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMED10P49755 219 aaKnown RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 MEOX1P50221 254 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 NR0B1P51843 470 aaKnown RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 MAD2L1Q13257 205 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 TMED1Q13445 227 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 MED22Q15528 200 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 CEBPEQ15744 281 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 NNATQ16517 81 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 EIF2S3LQ2VIR3 472 aaKnown RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 ZNF791Q3KP31 576 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 PLA1AQ53H76 456 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 KRBOX4Q5JUW0 171 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 FHL5Q5TD97 284 aa5.3□□□□□ -1.56
HMGB1P42-201ENST00000532126 IL23RQ5VWK5 629 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms