RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SERINC4A6NH21 518 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 KLRC4-KLRK1H3BQV0 150 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 M0QX08 132 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 SYT5O00445 386 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 EIF4E2O60573 245 aaKnown RBP11.43□□□□□ -0.58
COPB1-208ENST00000532088 STAMBPO95630 424 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 CCL3P10147 92 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 IL7RP16871 459 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 ELAVL4P26378 380 aaKnown RBP11.43□□□□□ -0.58
COPB1-208ENST00000532088 KCNJ5P48544 419 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 SUMO3P55854 103 aaPredicted RBP11.43□□□□□ -0.58
COPB1-208ENST00000532088 EEF1A1P68104 462 aaKnown RBP11.43□□□□□ -0.58
COPB1-208ENST00000532088 KCNJ10P78508 379 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 PLAURQ03405 335 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 C17orf67Q0P5P2 114 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 MAPK14Q16539 360 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 ZNF766Q5HY98 468 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 ZNF311Q5JNZ3 666 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 PDZK1Q5T2W1 519 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 LCN8Q6JVE9 175 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 ASB18Q6ZVZ8 466 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 EIF3MQ7L2H7 374 aaKnown RBP11.43□□□□□ -0.58
COPB1-208ENST00000532088 ARMC8Q8IUR7 673 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 ZNF440Q8IYI8 595 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 RNF148Q8N7C7 305 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 FAM71CQ8NEG0 241 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 OR5M3Q8NGP4 307 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 FIG4Q92562 907 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 CRELD1Q96HD1 420 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 DMRTB1Q96MA1 342 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 FAM173AQ9BQD7 235 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 TRIM15Q9C019 465 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 PROK2Q9HC23 129 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 ANKRD10Q9NXR5 420 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 FLRT3Q9NZU0 649 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 SEC14L3Q9UDX4 400 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 RPS6KA6Q9UK32 745 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 BAG5Q9UL15 447 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 SAMD4AQ9UPU9 718 aaKnown RBP11.43□□□□□ -0.58
COPB1-208ENST00000532088 ZNF443Q9Y2A4 671 aaPredicted RBP11.43□□□□□ -0.58
COPB1-208ENST00000532088 TP53TG5Q9Y2B4 290 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 CHD8Q9HCK8 2581 aa11.43□□□□□ -0.58
COPB1-208ENST00000532088 LAMA5O15230 3695 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 ACACBO00763 2458 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 CDHR4A6H8M9 788 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 CFAP73A6NFT4 308 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 ACOT8O14734 319 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 ARPC2O15144 300 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 TRIM3O75382 744 aaPredicted RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 PDE5AO76074 875 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 ANGPTL1O95841 491 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 HOXB6P17509 224 aaKnown RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 TCN1P20061 433 aaPredicted RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 CRYBA2P53672 197 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 ZNF169Q14929 603 aaPredicted RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 HYAL4Q2M3T9 481 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 APOOLQ6UXV4 268 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 CBLL1Q75N03 491 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 GALNT10Q86SR1 603 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 RBMXL3Q8N7X1 1067 aaKnown RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 FAM98AQ8NCA5 519 aaKnown RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 LSM14AQ8ND56 463 aaKnown RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 FAM156AQ8NDB6 213 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 OR2M7Q8NG81 312 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 LZICQ8WZA0 190 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 TAMM41Q96BW9 452 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 ZG16BQ96DA0 208 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 CLPTM1LQ96KA5 538 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 NSMCE2Q96MF7 247 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 RAB3IPQ96QF0 476 aaPredicted RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 DOHHQ9BU89 302 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 LAT2Q9GZY6 243 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 DCAF13Q9NV06 445 aaKnown RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 ADPRHL2Q9NX46 363 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 SLC7A8Q9UHI5 535 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 PACSIN3Q9UKS6 424 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 BOKQ9UMX3 212 aaPredicted RBP11.42□□□□□ -0.58
COPB1-208ENST00000532088 B3GNT3Q9Y2A9 372 aa11.42□□□□□ -0.58
COPB1-208ENST00000532088 NPIPA5A0A0B4J1W7 369 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 CENPVL1A0A0U1RR11 272 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 AQP12BA6NM10 295 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 NPIPA7E9PJI5 369 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 FAAHO00519 579 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 ZNF264O43296 627 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 PEX1O43933 1283 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 CSTAP01040 98 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 FAM87AP0C7U9 286 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 NPIPA8P0DM63 369 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 UBL4AP11441 157 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 CD247P20963 164 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 AQP1P29972 269 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 SLC6A8P48029 635 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 SELENOWP63302 87 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 LRRC23Q53EV4 343 aaPredicted RBP11.41□□□□□ -0.58
COPB1-208ENST00000532088 CYBRD1Q53TN4 286 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 C19orf48Q6RUI8 117 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 OLIG3Q7RTU3 272 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 MARCH3Q86UD3 253 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 DHFR2Q86XF0 187 aa11.41□□□□□ -0.58
COPB1-208ENST00000532088 VRK2Q86Y07 508 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms