RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 LRRC37BQ96QE4 947 aa15.47■□□□□ 0.07
PKP3-208ENST00000531857 KCNA7Q96RP8 456 aa15.47■□□□□ 0.07
PKP3-208ENST00000531857 TBL1XR1Q9BZK7 514 aa15.47■□□□□ 0.07
PKP3-208ENST00000531857 GLIPR2Q9H4G4 154 aa15.47■□□□□ 0.07
PKP3-208ENST00000531857 YLPM1P49750 1951 aaKnown RBP15.46■□□□□ 0.07
PKP3-208ENST00000531857 WDR91A4D1P6 747 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 CFAP73A6NFT4 308 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 OVOL3O00110 214 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 CXCL13O43927 109 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 DLX3O60479 287 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 BGNP21810 368 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 GABRA3P34903 492 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 CHI3L2Q15782 390 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 HMBOX1Q6NT76 420 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 MFSD12Q6NUT3 480 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 BEND4Q6ZU67 534 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 GALNT10Q86SR1 603 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 PIK3R3Q92569 461 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 AMDHD1Q96NU7 426 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 LMF2Q9BU23 707 aaKnown RBP15.46■□□□□ 0.07
PKP3-208ENST00000531857 REG4Q9BYZ8 158 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 C12orf49Q9H741 205 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 SAR1AQ9NR31 198 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 MRGBPQ9NV56 204 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 DDX18Q9NVP1 670 aaKnown RBP15.46■□□□□ 0.07
PKP3-208ENST00000531857 TMEM216Q9P0N5 145 aa15.46■□□□□ 0.07
PKP3-208ENST00000531857 SLCO1B7G3V0H7 640 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 TNFSF11O14788 317 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 TRIM13O60858 407 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 DNAJC8O75937 253 aaPredicted RBP15.45■□□□□ 0.06
PKP3-208ENST00000531857 NTN1O95631 604 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 SOD3P08294 240 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 PSMA4P25789 261 aaKnown RBP15.45■□□□□ 0.06
PKP3-208ENST00000531857 ARFIP2P53365 341 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 ZNF763Q0D2J5 394 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 ZNHIT3Q15649 155 aaPredicted RBP15.45■□□□□ 0.06
PKP3-208ENST00000531857 TSC22D1Q15714 1073 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 FAM71E1Q6IPT2 247 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.45■□□□□ 0.06
PKP3-208ENST00000531857 NEUROG1Q92886 237 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 S100PBPQ96BU1 408 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 KLHDC3Q9BQ90 382 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 SHCBP1LQ9BZQ2 653 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 RASSF4Q9H2L5 321 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 TMEM185BQ9H7F4 350 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 SIRT5Q9NXA8 310 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 MRTO4Q9UKD2 239 aaKnown RBP15.45■□□□□ 0.06
PKP3-208ENST00000531857 MCTS1Q9ULC4 181 aaKnown RBP15.45■□□□□ 0.06
PKP3-208ENST00000531857 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.45■□□□□ 0.06
PKP3-208ENST00000531857 GPR52Q9Y2T5 361 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 CADP27708 2225 aa15.45■□□□□ 0.06
PKP3-208ENST00000531857 A0A0J9YW62 118 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 RNF212BA8MTL3 300 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 ADAMDEC1O15204 470 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 CCDC22O60826 627 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 SLITRK5O94991 958 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 MYL2P10916 166 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 ZNF17P17021 662 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 PSMB1P20618 241 aaKnown RBP15.44■□□□□ 0.06
PKP3-208ENST00000531857 IMPDH1P20839 514 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 AGTR1P30556 359 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 CDKN1AP38936 164 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 GSTM5P46439 218 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 PSMD4P55036 377 aaKnown RBP15.44■□□□□ 0.06
PKP3-208ENST00000531857 FOXA1P55317 472 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 BST1Q10588 318 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 GALNTL6Q49A17 601 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 FAM91A1Q658Y4 838 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 ADAM5Q6NVV9 412 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 ATG4DQ86TL0 474 aaPredicted RBP15.44■□□□□ 0.06
PKP3-208ENST00000531857 PHC2Q8IXK0 858 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 GATSQ8NAP1 163 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 OR4C3Q8NH37 302 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 C10orf82Q8WW14 230 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 OR10A4Q9H209 315 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 SLCO1B3Q9NPD5 702 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 EQTNQ9NQ60 294 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 MIEF1Q9NQG6 463 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 GLRX2Q9NS18 164 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 TAS2R7Q9NYW3 318 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 STOML1Q9UBI4 398 aa15.44■□□□□ 0.06
PKP3-208ENST00000531857 CLOCKO15516 846 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 SYNGR4O95473 234 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 DANCRP0C864 163 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 NTSP30990 170 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 ACVR1BP36896 505 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 DNAJB13P59910 316 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 BNIP1Q12981 228 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 PLPPR5Q32ZL2 321 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 CGB2Q6NT52 195 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 ZYG11AQ6WRX3 759 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 ZNF551Q7Z340 670 aaPredicted RBP15.43■□□□□ 0.06
PKP3-208ENST00000531857 STK32CQ86UX6 486 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 SLC22A9Q8IVM8 553 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 GTPBP8Q8N3Z3 284 aaPredicted RBP15.43■□□□□ 0.06
PKP3-208ENST00000531857 OR2V1Q8NHB1 315 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 PIWIL2Q8TC59 973 aaKnown RBP15.43■□□□□ 0.06
PKP3-208ENST00000531857 ROBO4Q8WZ75 1007 aa15.43■□□□□ 0.06
PKP3-208ENST00000531857 TRMT61AQ96FX7 289 aaKnown RBP15.43■□□□□ 0.06
PKP3-208ENST00000531857 RNF145Q96MT1 663 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms