RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 RAI1Q7Z5J4 1906 aaPredicted RBP15.05■□□□□ 0
CPSF1-207ENST00000531727 NIPBLQ6KC79 2804 aaeCLIP15.05■□□□□ 0
CPSF1-207ENST00000531727 LYPLA1O75608 230 aaPredicted RBP15.05■□□□□ -0
CPSF1-207ENST00000531727 SLU7O95391 586 aaKnown RBP15.05■□□□□ -0
CPSF1-207ENST00000531727 INHBBP09529 407 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 PPP3CBP16298 524 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 ARRB2P32121 409 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 EIF1P41567 113 aaKnown RBP15.05■□□□□ -0
CPSF1-207ENST00000531727 CCT3P49368 545 aaKnown RBP15.05■□□□□ -0
CPSF1-207ENST00000531727 ZNF117Q03924 483 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 C6orf136Q5SQH8 315 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 PDSS1Q5T2R2 415 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 STAC2Q6ZMT1 411 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 C20orf204Q6ZNR8 217 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 P3H2Q8IVL5 708 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 LILRA2Q8N149 483 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 FNDC5Q8NAU1 212 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 ZNF527Q8NB42 609 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 OR56A1Q8NGH5 318 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 PHOSPHO1Q8TCT1 267 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 COQ8BQ96D53 544 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 KLHL15Q96M94 604 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 CCL19Q99731 98 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 HOXD1Q9GZZ0 328 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 CXorf36Q9H7Y0 433 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 ZDHHC2Q9UIJ5 367 aa15.05■□□□□ -0
CPSF1-207ENST00000531727 ACANP16112 2415 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 SKAP2O75563 359 aaPredicted RBP15.04■□□□□ -0
CPSF1-207ENST00000531727 SOX30O94993 753 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 THBDP07204 575 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 KRT16P08779 473 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 ELK4P28324 431 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 ADSLP30566 484 aaPredicted RBP15.04■□□□□ -0
CPSF1-207ENST00000531727 CARD18P57730 90 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 IFFO1Q0D2I5 559 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 FOXF1Q12946 379 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 TP53BP2Q13625 1128 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 LSM12Q3MHD2 195 aaKnown RBP15.04■□□□□ -0
CPSF1-207ENST00000531727 SPDYE7PQ495Y7 208 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 KLHL26Q53HC5 615 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 Q5PR19 223 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 DCST2Q5T1A1 773 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 IL23RQ5VWK5 629 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 BEND4Q6ZU67 534 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 SFXN5Q8TD22 340 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 ADAMTS15Q8TE58 950 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 OSTF1Q92882 214 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 PRPF18Q99633 342 aaKnown RBP15.04■□□□□ -0
CPSF1-207ENST00000531727 SMR3AQ99954 134 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 ROPN1BQ9BZX4 212 aaPredicted RBP15.04■□□□□ -0
CPSF1-207ENST00000531727 ROPN1Q9HAT0 212 aaPredicted RBP15.04■□□□□ -0
CPSF1-207ENST00000531727 FANCFQ9NPI8 374 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 GPATCH2Q9NW75 528 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 FAF1Q9UNN5 650 aaPredicted RBP15.04■□□□□ -0
CPSF1-207ENST00000531727 ACTL7BQ9Y614 415 aa15.04■□□□□ -0
CPSF1-207ENST00000531727 NPIPA5A0A0B4J1W7 369 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 NPIPA7E9PJI5 369 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 H3BNH8 94 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 OIP5O43482 229 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 C6orf47O95873 294 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 TUBBP07437 444 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 NPIPA8P0DM63 369 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 NID1P14543 1247 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 PRPS1L1P21108 318 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 ADH6P28332 368 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 SHC1P29353 583 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 AGTR1P30556 359 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 SFTPDP35247 375 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 P2RX1P51575 399 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 SUMO3P55854 103 aaPredicted RBP15.03■□□□□ -0
CPSF1-207ENST00000531727 VSNL1P62760 191 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 ZNF239Q16600 458 aaKnown RBP15.03■□□□□ -0
CPSF1-207ENST00000531727 BEX5Q5H9J7 111 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.03■□□□□ -0
CPSF1-207ENST00000531727 GTF2IRD2BQ6EKJ0 949 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 CBLN3Q6UW01 205 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 GTF2IRD2Q86UP8 949 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 STK32CQ86UX6 486 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 RIMKLAQ8IXN7 391 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 KRTCAP2Q8N6L1 136 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 NUDT8Q8WV74 236 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 MOAP1Q96BY2 351 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 BHLHE41Q9C0J9 482 aaPredicted RBP15.03■□□□□ -0
CPSF1-207ENST00000531727 ICAM5Q9UMF0 924 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 CARD8Q9Y2G2 431 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 GPC6Q9Y625 555 aaPredicted RBP15.03■□□□□ -0
CPSF1-207ENST00000531727 KCNE3Q9Y6H6 103 aa15.03■□□□□ -0
CPSF1-207ENST00000531727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.02■□□□□ -0
CPSF1-207ENST00000531727 KLF4O43474 513 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 EFNA2O43921 213 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 NUDT14O95848 222 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 BPGMP07738 259 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 PABPC4LP0CB38 370 aaKnown RBP15.02■□□□□ -0
CPSF1-207ENST00000531727 CREB1P16220 341 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 RNF144AP50876 292 aaPredicted RBP15.02■□□□□ -0
CPSF1-207ENST00000531727 ATP12AP54707 1039 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 LTBQ06643 244 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 PRSS57Q6UWY2 283 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 FBXO27Q8NI29 283 aa15.02■□□□□ -0
CPSF1-207ENST00000531727 RNF128Q8TEB7 428 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms