RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ZNF767PQ75MW2 155 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 MEPCEQ7L2J0 689 aaKnown RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 PRSS45Q7RTY3 260 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 LRRC28Q86X40 367 aaPredicted RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 ZNF655Q8N720 491 aaPredicted RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 SDR9C7Q8NEX9 313 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 OR13C5Q8NGS8 318 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 PFN4Q8NHR9 129 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 UPRTQ96BW1 309 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 BPIFA2Q96DR5 249 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 RBM18Q96H35 190 aaKnown RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 WDFY2Q96P53 400 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 GINS4Q9BRT9 223 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 NANSQ9NR45 359 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 SPHK1Q9NYA1 384 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 PCYT1BQ9Y5K3 369 aaPredicted RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 FKBP7Q9Y680 259 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 TNFRSF10AO00220 468 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 RGS13O14921 159 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 SMAD9O15198 467 aaKnown RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 RFPL3O75679 317 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 SOX30O94993 753 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 C4BPBP20851 252 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 PCBP4P57723 403 aaKnown RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 VSX2P58304 361 aaPredicted RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 CDK5Q00535 292 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 EXOSC7Q15024 291 aaKnown RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 ZNF77Q15935 545 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 SFXN4Q6P4A7 337 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 FAM220AQ7Z4H9 259 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 ASPGQ86U10 573 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 OR4Q3Q8NH05 313 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 ZFAND1Q8TCF1 268 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 SMPDL3BQ92485 455 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 MKRN2Q9H000 416 aaKnown RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 SIDT1Q9NXL6 827 aaKnown RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 KLHL21Q9UJP4 597 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 ZNF443Q9Y2A4 671 aaPredicted RBP10.58□□□□□ -0.72
NXF1-211ENST00000531709 TRPM6Q9BX84 2022 aa10.58□□□□□ -0.72
NXF1-211ENST00000531709 ICMTO60725 284 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 APODP05090 189 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 HTR1FP30939 366 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 CST6Q15828 149 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 GLYR1Q49A26 553 aaPredicted RBP10.57□□□□□ -0.72
NXF1-211ENST00000531709 TMEM201Q5SNT2 666 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 UBE2Q1Q7Z7E8 422 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 SIRT6Q8N6T7 355 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 GATSQ8NAP1 163 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 GHSRQ92847 366 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 MS4A6EQ96DS6 147 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 C1QTNF2Q9BXJ5 285 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 SLC25A18Q9H1K4 315 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 CDCP1Q9H5V8 836 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 C6orf106Q9H6K1 298 aaPredicted RBP10.57□□□□□ -0.72
NXF1-211ENST00000531709 RANBP3Q9H6Z4 567 aaPredicted RBP10.57□□□□□ -0.72
NXF1-211ENST00000531709 WSB2Q9NYS7 404 aaPredicted RBP10.57□□□□□ -0.72
NXF1-211ENST00000531709 MAFFQ9ULX9 164 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 SLC43A1O75387 559 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 KAT7O95251 611 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 AGR2O95994 175 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 IFNA7P01567 189 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 CXCL10P02778 98 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 TRAPPC2P0DI81 140 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 TRAPPC2BP0DI82 140 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 CFL1P23528 166 aaKnown RBP10.57□□□□□ -0.72
NXF1-211ENST00000531709 HTRA3P83110 453 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 GALK2Q01415 458 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 DOC2BQ14184 412 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 AGERQ15109 404 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 MRPL2Q5T653 305 aaKnown RBP10.57□□□□□ -0.72
NXF1-211ENST00000531709 GPR155Q7Z3F1 870 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 COMTD1Q86VU5 262 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 GPALPP1Q8IXQ4 340 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 LINC01555Q8NAE3 123 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 TMIEQ8NEW7 156 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 HSPA12BQ96MM6 686 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 TCF7L1Q9HCS4 588 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 B3GAT2Q9NPZ5 323 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 OR6C2Q9NZP2 312 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 SESN1Q9Y6P5 492 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 PRAMEF27A3QJZ7 478 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 H0YC42 278 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 SERPINA3P01011 423 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 C1QBP02746 253 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 CLUP10909 449 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 PEPDP12955 493 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 HLA-DMAP28067 261 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 CLDN12P56749 244 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 CRMP1Q14194 572 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 IRF4Q15306 451 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 PYHIN1Q6K0P9 492 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 RFPL4BQ6ZWI9 263 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 MBOAT2Q6ZWT7 520 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 FAM109AQ8N4B1 249 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 FTMTQ8N4E7 242 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 TSACCQ96A04 125 aaPredicted RBP10.57□□□□□ -0.72
NXF1-211ENST00000531709 WDR34Q96EX3 536 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 SLC35A4Q96G79 324 aa10.57□□□□□ -0.72
NXF1-211ENST00000531709 NARS2Q96I59 477 aaKnown RBP10.57□□□□□ -0.72
NXF1-211ENST00000531709 MSLNLQ96KJ4 702 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms