RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 CLEC12AQ5QGZ9 265 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 CAPN13Q6MZZ7 669 aaPredicted RBP8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 SSX7Q7RTT5 188 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF367Q7RTV3 350 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 NUP54Q7Z3B4 507 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 CBARPQ8N350 705 aaPredicted RBP8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 OR1N1Q8NGS0 311 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF671Q8TAW3 534 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 GPBAR1Q8TDU6 330 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF599Q96NL3 588 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 C20orf85Q9H1P6 137 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 EPHX3Q9H6B9 360 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 NT5DC2Q9H857 520 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 LUZP4Q9P127 313 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 SEMA5BQ9P283 1151 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 IL36AQ9UHA7 158 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 GSTK1Q9Y2Q3 226 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 MROH2AA6NES4 1674 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 CASZ1Q86V15 1759 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 DLC1Q96QB1 1528 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 A0A1W2PRB8 838 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 SYT5O00445 386 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 DPM1O60762 260 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 ADAP1O75689 374 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 GSTP1P09211 210 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 HIST1H1BP16401 226 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 HOXC12P31275 282 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 EVX1P49640 407 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 ADPRHP54922 357 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 SV2CQ496J9 727 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 TANGO2Q6ICL3 276 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 KIAA1161Q6NSJ0 714 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF664Q8N3J9 261 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 SIDT2Q8NBJ9 832 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 TIFAQ96CG3 184 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 CASD1Q96PB1 797 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 LMF1Q96S06 567 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 CYP2S1Q96SQ9 504 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 CGRRF1Q99675 332 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 C2orf88Q9BSF0 95 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 WDR18Q9BV38 432 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 CCDC86Q9H6F5 360 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 PPP1R3EQ9H7J1 279 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 ING1Q9UK53 422 aaPredicted RBP8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 GJD2Q9UKL4 321 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 CACNA1IQ9P0X4 2223 aa8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF638Q14966 1978 aaKnown RBP8.29□□□□□ -1.08
CAPRIN1-209ENST00000530820 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 CPSF4LA6NMK7 179 aaKnown RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 DCTN6O00399 190 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 PPP1R2P9O14990 202 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 KIAA0355O15063 1070 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 CDC40O60508 579 aaKnown RBP eCLIP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 OR13C7P0DN81 318 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 BPIP17213 487 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 CD1CP29017 333 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 DNAJA1P31689 397 aaKnown RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 NOS2P35228 1153 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 CHI3L1P36222 383 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 RFX3P48380 749 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 NOVA1P51513 510 aaKnown RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 MLF1P58340 268 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 AIMP2Q13155 320 aaKnown RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 GAB1Q13480 694 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ATXN7L2Q5T6C5 722 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 OR10K2Q6IF99 312 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 APOOLQ6UXV4 268 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 CTU1Q7Z7A3 348 aaKnown RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 CLEC14AQ86T13 490 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 LRRC28Q86X40 367 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 HHIPL1Q96JK4 782 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 OR2M2Q96R28 347 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 RHOJQ9H4E5 214 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 TUBA4BQ9H853 241 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 SMCO4Q9NRQ5 59 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 PRMT7Q9NVM4 692 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 KLK11Q9UBX7 282 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 NPFFR2Q9Y5X5 522 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 NID2Q14112 1375 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 SMCO3A2RU48 225 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF705FA8MVS1 300 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 KERAO60938 352 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 MATN4O95460 622 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF705DP0CH99 300 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF705BP0CI00 300 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 TIMP2P16035 220 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 HOXB8P17481 243 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 TPSB2P20231 275 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 SLC6A4P31645 630 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 BMP8BP34820 402 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF140P52738 457 aaPredicted RBP8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 S100A10P60903 97 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ACTA2P62736 377 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ACTG2P63267 376 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ACTC1P68032 377 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ACTA1P68133 377 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 ZNF616Q08AN1 781 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 TPSAB1Q15661 275 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 TKFCQ3LXA3 575 aa8.28□□□□□ -1.08
CAPRIN1-209ENST00000530820 SLC27A1Q6PCB7 646 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms