RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 ENTPD6O75354 484 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 UBXN7O94888 489 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SOX14O95416 240 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 CSF2P04141 144 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 INHBBP09529 407 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 FAM87AP0C7U9 286 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 GIMD1P0DJR0 217 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 ACP2P11117 423 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 PVRP15151 417 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 MYL12AP19105 171 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 NR4A1P22736 598 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 FPR3P25089 353 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SOX6P35712 828 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 TGFBR2P37173 567 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SLC15A1P46059 708 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 RGS6P49758 472 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 BMXP51813 675 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 EMP3P54852 163 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 PSMD4P55036 377 aaKnown RBP10.9□□□□□ -0.66
USF1-208ENST00000528768 VBP1P61758 197 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 CDK5Q00535 292 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 ZNF155Q12901 538 aaPredicted RBP10.9□□□□□ -0.66
USF1-208ENST00000528768 TMED1Q13445 227 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 C1orf61Q13536 156 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 MED22Q15528 200 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SNAPC1Q16533 368 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 DUSP5Q16690 384 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 ZNF542PQ5EBM4 170 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 TCTE1Q5JU00 501 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 DCST2Q5T1A1 773 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 TYW3Q6IPR3 259 aaKnown RBP10.9□□□□□ -0.66
USF1-208ENST00000528768 FAM111BQ6SJ93 734 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 FRRS1Q6ZNA5 592 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 GDPGP1Q6ZNW5 385 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 MBOAT2Q6ZWT7 520 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 ZER1Q7Z7L7 766 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 OR4N5Q8IXE1 308 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 ZNF595Q8IYB9 648 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 RNF113BQ8IZP6 322 aaKnown RBP10.9□□□□□ -0.66
USF1-208ENST00000528768 CLDN22Q8N7P3 220 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 TCEANCQ8N8B7 351 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SLC16A11Q8NCK7 471 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 OR6C4Q8NGE1 309 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 DYNC2LI1Q8TCX1 351 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 GPR151Q8TDV0 419 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 PATE1Q8WXA2 126 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 DIO2Q92813 273 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 NAT6Q93015 286 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SLC41A3Q96GZ6 507 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 IL4I1Q96RQ9 567 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SDF2Q99470 211 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 RHNO1Q9BSD3 238 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 TSSK6Q9BXA6 273 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 ZNF350Q9GZX5 532 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SAP130Q9H0E3 1048 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 DCSTAMPQ9H295 470 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 MMP27Q9H306 513 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 TCEAL2Q9H3H9 227 aaPredicted RBP10.9□□□□□ -0.66
USF1-208ENST00000528768 SYNPO2LQ9H987 977 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 MED17Q9NVC6 651 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 TBCCD1Q9NVR7 557 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 PLCL2Q9UPR0 1127 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 TMEM5Q9Y2B1 443 aa10.9□□□□□ -0.66
USF1-208ENST00000528768 SPTBN1Q01082 2364 aaKnown RBP10.9□□□□□ -0.66
USF1-208ENST00000528768 A0A087WUU8 490 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 LY6G6EA0A0G2JKS1 128 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 A0A1W2PNU3 283 aaPredicted RBP10.89□□□□□ -0.67
USF1-208ENST00000528768 TRAPPC13A5PLN9 417 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 ZNF860A6NHJ4 632 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 FAM227AF5H4B4 570 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 M0R082 166 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 KPNA4O00629 521 aaPredicted RBP10.89□□□□□ -0.67
USF1-208ENST00000528768 CHST10O43529 356 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 TLX2O43763 284 aaPredicted RBP10.89□□□□□ -0.67
USF1-208ENST00000528768 FGF17O60258 216 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 TPST2O60704 377 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 SEMA7AO75326 666 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 RAB36O95755 333 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 HSMCR30P0CW71 290 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 LIPCP11150 499 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 NME1P15531 152 aaKnown RBP10.89□□□□□ -0.67
USF1-208ENST00000528768 TYRP1P17643 537 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 S100A5P33763 92 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 PTGER1P34995 402 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 FASLGP48023 281 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 LSM3P62310 102 aaKnown RBP10.89□□□□□ -0.67
USF1-208ENST00000528768 FOXK1P85037 733 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 STX4Q12846 297 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 MAP4K2Q12851 820 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 GPR68Q15743 365 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 SYT16Q17RD7 645 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.89□□□□□ -0.67
USF1-208ENST00000528768 FHL5Q5TD97 284 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 RPL13AP3Q6NVV1 102 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 TUBA3EQ6PEY2 450 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 SLC34A3Q8N130 599 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 MINDY2Q8NBR6 621 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 PROKR2Q8NFJ6 384 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 MCFD2Q8NI22 146 aa10.89□□□□□ -0.67
USF1-208ENST00000528768 NDNFQ8TB73 568 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms