RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CCL11P51671 97 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 NCBP1Q09161 790 aaKnown RBP4.92□□□□□ -1.62
PCF11-202ENST00000528336 CDH18Q13634 790 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 GCKRQ14397 625 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 MTF1Q14872 753 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 NECTIN1Q15223 517 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 RBBP7Q16576 425 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 PARP6Q2NL67 630 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 BEND3Q5T5X7 828 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 TRIM65Q6PJ69 517 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 SIGLEC15Q6ZMC9 328 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 Q6ZPB1 254 aaPredicted RBP4.92□□□□□ -1.62
PCF11-202ENST00000528336 STXBP4Q6ZWJ1 553 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 C12orf56Q8IXR9 622 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 ZNF683Q8IZ20 524 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 RCOR2Q8IZ40 523 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 TRPV3Q8NET8 790 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 ZNRF4Q8WWF5 429 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 ASZ1Q8WWH4 475 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 HAS2Q92819 552 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 SLCO2A1Q92959 643 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 MCHR2Q969V1 340 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 TRNT1Q96Q11 434 aaKnown RBP4.92□□□□□ -1.62
PCF11-202ENST00000528336 PANX1Q96RD7 426 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 KRT12Q99456 494 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 CDCA3Q99618 268 aaPredicted RBP4.92□□□□□ -1.62
PCF11-202ENST00000528336 ACBD6Q9BR61 282 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 SPATA16Q9BXB7 569 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 TRIM15Q9C019 465 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 UPF3AQ9H1J1 476 aaKnown RBP4.92□□□□□ -1.62
PCF11-202ENST00000528336 RHBGQ9H310 441 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 PSTPIP2Q9H939 334 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 TUBG2Q9NRH3 451 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 PDP1Q9P0J1 537 aaPredicted RBP4.92□□□□□ -1.62
PCF11-202ENST00000528336 TRMT112Q9UI30 125 aaKnown RBP4.92□□□□□ -1.62
PCF11-202ENST00000528336 KLF2Q9Y5W3 355 aaPredicted RBP4.92□□□□□ -1.62
PCF11-202ENST00000528336 PRSS21Q9Y6M0 314 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 CSNK1G3Q9Y6M4 447 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 CACNA1FO60840 1977 aa4.92□□□□□ -1.62
PCF11-202ENST00000528336 ARFGEF2Q9Y6D5 1785 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 A0A0J9YWU9 116 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 PCP4L1A6NKN8 68 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 C2CD4DB7Z1M9 353 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 PPIAL4DF5H284 164 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 GOLGA8TH3BQL2 631 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 HIP1O00291 1037 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 ARPC3O15145 178 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 RNF13O43567 381 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 BCAS1O75363 584 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 UPK3AO75631 287 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 CRTAPO75718 401 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 CABYRO75952 493 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 PCCAP05165 728 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 CA3P07451 260 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 PLEKP08567 350 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 IGFBP1P08833 259 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 ALPIP09923 528 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 CPA3P15088 417 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 NMT1P30419 496 aaKnown RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 RPL9P32969 192 aaKnown RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 RPS5P46782 204 aaKnown RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 SLC6A8P48029 635 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 RGS19P49795 217 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 DAOAP59103 153 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 MYL6P60660 151 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 YWHAGP61981 247 aaKnown RBP eCLIP4.91□□□□□ -1.62
PCF11-202ENST00000528336 MYBPC1Q00872 1141 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 CTSL3PQ5NE16 218 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 FAM46CQ5VWP2 391 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 PYHIN1Q6K0P9 492 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 SYT10Q6XYQ8 523 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 CDHR3Q6ZTQ4 885 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 SLC24A5Q71RS6 500 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 FCRLAQ7L513 359 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 FAM89BQ8N5H3 189 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 OR4C5Q8NGB2 326 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 OR5D13Q8NGL4 314 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 SAP25Q8TEE9 199 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 MAIP1Q8WWC4 291 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 FRAT1Q92837 279 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 TOP1MTQ969P6 601 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 KIAA1143Q96AT1 154 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 ZNF689Q96CS4 500 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 GPR137Q96N19 417 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 CYTH2Q99418 400 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 VGLL1Q99990 258 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 CBWD1Q9BRT8 395 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 TRIM51Q9BSJ1 452 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 CABLES2Q9BTV7 478 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 ANKRD60Q9BZ19 345 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 FRMD8P1Q9BZ68 369 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 EGLN3Q9H6Z9 239 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 GEMIN7Q9H840 131 aaKnown RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 RNF121Q9H920 327 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 ERVK-18Q9QC07 812 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 SEC14L3Q9UDX4 400 aa4.91□□□□□ -1.62
PCF11-202ENST00000528336 NOCTQ9UK39 431 aaKnown RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 PACSIN2Q9UNF0 486 aaPredicted RBP4.91□□□□□ -1.62
PCF11-202ENST00000528336 CA5BQ9Y2D0 317 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms