RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 MED17Q9NVC6 651 aa10.92□□□□□ -0.66
TRAPPC4-209ENST00000528230 PAQR5Q9NXK6 330 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC4-209ENST00000528230 ICAM5Q9UMF0 924 aa10.92□□□□□ -0.66
TRAPPC4-209ENST00000528230 VDAC3Q9Y277 283 aa10.92□□□□□ -0.66
TRAPPC4-209ENST00000528230 L3MBTL1Q9Y468 752 aa10.92□□□□□ -0.66
TRAPPC4-209ENST00000528230 ZNF175Q9Y473 711 aa10.92□□□□□ -0.66
TRAPPC4-209ENST00000528230 NOTCH2Q04721 2471 aa10.92□□□□□ -0.66
TRAPPC4-209ENST00000528230 CCDC154A6NI56 674 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 SLC22A20A6NK97 555 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 GTPBP1O00178 669 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 GMFGO60234 142 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 EIF4E2O60573 245 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 TGM6O95932 706 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 OR12D1P0DN82 309 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 CHI3L1P36222 383 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 MAGEA8P43361 318 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 MRPL19P49406 292 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 ANXA11P50995 505 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 CLDN20P56880 219 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 RAC1P63000 192 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 PPP2R2AP63151 447 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 ZNF117Q03924 483 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 TLE4Q04727 773 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 FOXF2Q12947 444 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 MSANTD1Q6ZTZ1 278 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 C16orf62Q7Z3J2 963 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 P4HA3Q7Z4N8 544 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 GGNQ86UU5 652 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 KIF18BQ86Y91 864 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 UBQLNLQ8IYU4 475 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 TOR1AIP2Q8NFQ8 470 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 OR5M1Q8NGP8 315 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 XAGE5Q8WWM1 108 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 INTS12Q96CB8 462 aaKnown RBP10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 SH3YL1Q96HL8 342 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 LURAP1Q96LR2 239 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 OR52B2Q96RD2 323 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 ZNF559Q9BR84 538 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 ZNF350Q9GZX5 532 aa10.91□□□□□ -0.66
TRAPPC4-209ENST00000528230 MPDZO75970 2070 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 NPIPA5A0A0B4J1W7 369 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 SERINC4A6NH21 518 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 NPIPA7E9PJI5 369 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 ADAMDEC1O15204 470 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 ZNF264O43296 627 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 SEC14L5O43304 696 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 FCMRO60667 390 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 DIAPH2O60879 1101 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 DNAJA2O60884 412 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 ZCCHC18P0CG32 403 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 NPIPA8P0DM63 369 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 UQCRC1P31930 480 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 PCYT1AP49585 367 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 KHKP50053 298 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 AGFG1P52594 562 aaKnown RBP10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 FGFBP1Q14512 234 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 GPR68Q15743 365 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 PDZK1Q5T2W1 519 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 CBLN3Q6UW01 205 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 ZNF621Q6ZSS3 439 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 ESPNLQ6ZVH7 1005 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 OR5W2Q8NH69 310 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 POC1BQ8TC44 478 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 GPR119Q8TDV5 335 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 DYDC1Q8WWB3 177 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 PMM1Q92871 262 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 ROPN1LQ96C74 230 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 ARSGQ96EG1 525 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 RNF145Q96MT1 663 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 INPP5KQ9BT40 448 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 CCDC28BQ9BUN5 200 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 PINK1Q9BXM7 581 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 LAT2Q9GZY6 243 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 RMND5AQ9H871 391 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 INTS9Q9NV88 658 aaKnown RBP10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 MKLN1Q9UL63 735 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 LIPT1Q9Y234 373 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 CARD8Q9Y2G2 431 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 WDR45Q9Y484 360 aa10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 GPC6Q9Y625 555 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC4-209ENST00000528230 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 A0A1W2PNV4 684 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 SHISA8B8ZZ34 492 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 C9JVG2 144 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 H0YC42 278 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 HMGN4O00479 90 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 RFXANKO14593 260 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 OIP5O43482 229 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 UGT2B17O75795 530 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 TNFSF13O75888 250 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 KRT75O95678 551 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 UBL4AP11441 157 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 FCGR2AP12318 317 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 ME2P23368 584 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 ELK4P28324 431 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 KIR2DL3P43628 341 aa10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 POLR2JP52435 117 aaKnown RBP10.89□□□□□ -0.67
TRAPPC4-209ENST00000528230 CASP9P55211 416 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms