RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 EXD2Q9NVH0 621 aa29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 PAQR5Q9NXK6 330 aaPredicted RBP29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 ICAM5Q9UMF0 924 aa29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 MED12LQ86YW9 2145 aa29.74■■■□□ 2.35
SSSCA1-205ENST00000527920 SPG11Q96JI7 2443 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 LINGO3P0C6S8 592 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 FCGR2AP12318 317 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 PCYT1AP49585 367 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 UFM1P61960 85 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 RAC1P63000 192 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 ARHGAP11BQ3KRB8 267 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 SAXO2Q658L1 398 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 HEPHL1Q6MZM0 1159 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 ZZZ3Q8IYH5 903 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 CLEC4FQ8N1N0 589 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 PIWIL2Q8TC59 973 aaKnown RBP29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 SMPDL3BQ92485 455 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 NEURL3Q96EH8 262 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 RNF145Q96MT1 663 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 RBM24Q9BX46 236 aaKnown RBP29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 ZNF350Q9GZX5 532 aa29.73■■■□□ 2.35
SSSCA1-205ENST00000527920 NPIPA5A0A0B4J1W7 369 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 GOLGA8QA0A0J9YX86 632 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 GOLGA8OA6NCC3 632 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 NPIPA7E9PJI5 369 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 GOLGA8NF8WBI6 632 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 STX11O75558 287 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 CPSF4O95639 269 aaKnown RBP29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 NPIPA8P0DM63 369 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 KITP10721 976 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 ELK4P28324 431 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 P2RX1P51575 399 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 FGFBP1Q14512 234 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 PON3Q15166 354 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 ZNF141Q15928 474 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 TMEM200AQ86VY9 491 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 OR51I1Q9H343 314 aa29.72■■■□□ 2.35
SSSCA1-205ENST00000527920 FAM221AA4D161 298 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 MSTNO14793 375 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 ADAMDEC1O15204 470 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 CTAG2O75638 210 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 PGRP06401 933 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 IDO1P14902 403 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 ADH6P28332 368 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 CDH24Q86UP0 819 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 FNDC9Q8TBE3 224 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 POC1BQ8TC44 478 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 ZNF75CPQ92670 426 aaPredicted RBP29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 ARL8AQ96BM9 186 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 ADGRG7Q96K78 797 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 ZBTB18Q99592 522 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 KLHDC3Q9BQ90 382 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 POLE3Q9NRF9 147 aa29.71■■■□□ 2.35
SSSCA1-205ENST00000527920 TUBAL3A6NHL2 446 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 A8MXE2 369 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 EIF4E2O60573 245 aaKnown RBP29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 ME2P23368 584 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 IL12AP29459 219 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 TXNL4AP83876 142 aaKnown RBP29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 SNTB1Q13884 538 aaKnown RBP29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 CTU2Q2VPK5 515 aaKnown RBP29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 ATAD3BQ5T9A4 648 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 CBLN3Q6UW01 205 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 ESPNLQ6ZVH7 1005 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 C16orf62Q7Z3J2 963 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 TRIML2Q8N7C3 387 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 TOR1AIP2Q8NFQ8 470 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 STARD4Q96DR4 205 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 ZNF845Q96IR2 970 aaPredicted RBP29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 NPAS1Q99742 590 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 GALNT8Q9NY28 637 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 CARD8Q9Y2G2 431 aa29.7■■■□□ 2.35
SSSCA1-205ENST00000527920 ANKRD17O75179 2603 aaKnown RBP29.7■■■□□ 2.34
SSSCA1-205ENST00000527920 GTPBP1O00178 669 aaKnown RBP29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 EIF1AYO14602 144 aaKnown RBP29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 CPA2P48052 419 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 KHKP50053 298 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 NME5P56597 212 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 DAZAP2Q15038 168 aaPredicted RBP29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 GUSBP1Q15486 140 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 SGCBQ16585 318 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 PDCD4Q53EL6 469 aaKnown RBP29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 LUZP2Q86TE4 346 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 ARSGQ96EG1 525 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 ATP6V1G3Q96LB4 118 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 SLC35A5Q9BS91 424 aa29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 GPC6Q9Y625 555 aaPredicted RBP29.69■■■□□ 2.34
SSSCA1-205ENST00000527920 ZNF195O14628 629 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 OIP5O43482 229 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 GOSR1O95249 250 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 UBL4AP11441 157 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 KIR2DL2P43627 348 aaPredicted RBP29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 GSTA3Q16772 222 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 PDZK1Q5T2W1 519 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 MAVSQ7Z434 540 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 ZNF614Q8N883 585 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 OR10D3Q8NH80 312 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 C7orf26Q96N11 449 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 OR52E6Q96RD3 313 aa29.68■■■□□ 2.34
SSSCA1-205ENST00000527920 SERINC4A6NH21 518 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms