RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-212	ENST00000527805	PATE3	B3GLJ2	98 aa		13.8	□□□□□ -0.2
ATM-212	ENST00000527805	SOD1	P00441	154 aa		13.8	□□□□□ -0.2
ATM-212	ENST00000527805	RPS19BP1	Q86WX3	136 aa	Known RBP	13.8	□□□□□ -0.2
ATM-212	ENST00000527805	UEVLD	Q8IX04	471 aa		13.8	□□□□□ -0.2
ATM-212	ENST00000527805	THAP4	Q8WY91	577 aa		13.8	□□□□□ -0.2
ATM-212	ENST00000527805	UTP23	Q9BRU9	249 aa	Known RBP	13.8	□□□□□ -0.2
ATM-212	ENST00000527805	PRDM7	Q9NQW5	492 aa		13.8	□□□□□ -0.2
ATM-212	ENST00000527805		H3BSA7	217 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	MT-ND2	P03891	347 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	RASGEF1B	Q0VAM2	473 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	CHST4	Q8NCG5	386 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	SLC2A12	Q8TD20	617 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	NRG4	Q8WWG1	115 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	IER3IP1	Q9Y5U9	82 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	HSPE1-MOB4	S4R3N1	261 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	CIB4	A0PJX0	185 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	PSMD9	O00233	223 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	ITGA10	O75578	1167 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	TNFSF15	O95150	251 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	HOXB3	P14651	431 aa	Predicted RBP	13.79	□□□□□ -0.2
ATM-212	ENST00000527805	MTNR1A	P48039	350 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	GK3P	Q14409	553 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	MZT2B	Q6NZ67	158 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	C11orf88	Q6PI97	169 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	IGFN1	Q86VF2	1251 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	CPO	Q8IVL8	374 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	VWCE	Q96DN2	955 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	TPR	P12270	2363 aa	Known RBP	13.79	□□□□□ -0.2
ATM-212	ENST00000527805	CD46	P15529	392 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	PDE7A	Q13946	482 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	IL18	Q14116	193 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	RNASE12	Q5GAN4	147 aa	Known RBP	13.79	□□□□□ -0.2
ATM-212	ENST00000527805	SAXO2	Q658L1	398 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	KRT74	Q7RTS7	529 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	ACBD7	Q8N6N7	88 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	OR2A5	Q96R48	311 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	CHST8	Q9H2A9	424 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	ANKRD10	Q9NXR5	420 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	TUBA8	Q9NY65	449 aa	Predicted RBP	13.79	□□□□□ -0.2
ATM-212	ENST00000527805	DENR	O43583	198 aa	Known RBP	13.79	□□□□□ -0.2
ATM-212	ENST00000527805	PDGFB	P01127	241 aa	Predicted RBP	13.79	□□□□□ -0.2
ATM-212	ENST00000527805	GRPR	P30550	384 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	HTR3A	P46098	478 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	FASLG	P48023	281 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	PLP2	Q04941	152 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	ZNF846	Q147U1	533 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	IDNK	Q5T6J7	187 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	PAMR1	Q6UXH9	720 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	USP43	Q70EL4	1123 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	GPR137C	Q8N3F9	429 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	PMM1	Q92871	262 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	CCNL2	Q96S94	520 aa	Predicted RBP	13.79	□□□□□ -0.2
ATM-212	ENST00000527805	TAS2R7	Q9NYW3	318 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	COMMD3	Q9UBI1	195 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	TMEM14A	Q9Y6G1	99 aa		13.79	□□□□□ -0.2
ATM-212	ENST00000527805	ASXL3	Q9C0F0	2248 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	CS	O75390	466 aa	Known RBP	13.78	□□□□□ -0.2
ATM-212	ENST00000527805	CYB5A	P00167	134 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	PYCR1	P32322	319 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	MAP2K4	P45985	399 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	EXT1	Q16394	746 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	OR6T1	Q8NGN1	323 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	MRO	Q9BYG7	248 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	EVA1A	Q9H8M9	152 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805		A0A0A6YYD5	115 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	SLC1A7	O00341	560 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	P2RX6	O15547	441 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	DNAJB5	O75953	348 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	PRKAR1B	P31321	381 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	STT3A	P46977	705 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	ZNF283	Q8N7M2	679 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	SLC35A4	Q96G79	324 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	STAC	Q99469	402 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	IKZF5	Q9H5V7	419 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	GPR83	Q9NYM4	423 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	BOK	Q9UMX3	212 aa	Predicted RBP	13.78	□□□□□ -0.2
ATM-212	ENST00000527805	KCNE1B	A0A087WTH5	132 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	SH3PXD2B	A1X283	911 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	KHDRBS3	O75525	346 aa	Known RBP	13.78	□□□□□ -0.2
ATM-212	ENST00000527805	ARL6IP5	O75915	188 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	ZGLP1	P0C6A0	271 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	APOF	Q13790	326 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	AGER	Q15109	404 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	DUSP7	Q16829	419 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	C11orf24	Q96F05	449 aa	Predicted RBP	13.78	□□□□□ -0.2
ATM-212	ENST00000527805	PRR14	Q9BWN1	585 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	NUP214	P35658	2090 aa	Predicted RBP	13.78	□□□□□ -0.2
ATM-212	ENST00000527805	TRAV27	A0A087WT01	109 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	TRBV4-1	A0A0J9YWV2	114 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	SYT5	O00445	386 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	HMGN4	O00479	90 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	PDCD5	O14737	125 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	RFPL3	O75679	317 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	ITIH1	P19827	911 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	MYF6	P23409	242 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	DLST	P36957	453 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	ACTC1	P68032	377 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	ACTA1	P68133	377 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	PPP2R2B	Q00005	443 aa		13.78	□□□□□ -0.2
ATM-212	ENST00000527805	RHAG	Q02094	409 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms