RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PMS2P3Q13401 168 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 DGCR6Q14129 220 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 EBPQ15125 230 aaKnown RBP17.31■□□□□ 0.36
SMPD1-203ENST00000527275 NPTX1Q15818 432 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 DHRS4L2Q6PKH6 230 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 COX18Q8N8Q8 333 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 NACC2Q96BF6 587 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 IMMP1LQ96LU5 166 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 ARHGDIGQ99819 225 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 ZNF700Q9H0M5 742 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 RASSF1Q9NS23 344 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 ENOPH1Q9UHY7 261 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 ZNF232Q9UNY5 417 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 GPR55Q9Y2T6 319 aaPredicted RBP17.31■□□□□ 0.36
SMPD1-203ENST00000527275 IFT52Q9Y366 437 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 CHST2Q9Y4C5 530 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 FRYQ5TBA9 3013 aa17.31■□□□□ 0.36
SMPD1-203ENST00000527275 C2orf92A0A1B0GVN3 265 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 XPNPEP2O43895 674 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 OR10H3O60404 316 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 PLA2G5P39877 138 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 BTBD16Q32M84 506 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 CCNJQ5T5M9 372 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 PEX5LQ8IYB4 626 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 ZSCAN1Q8NBB4 408 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 SLC7A13Q8TCU3 470 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 ADIPOR1Q96A54 375 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 KIAA1143Q96AT1 154 aaPredicted RBP17.3■□□□□ 0.36
SMPD1-203ENST00000527275 NMD3Q96D46 503 aaKnown RBP17.3■□□□□ 0.36
SMPD1-203ENST00000527275 VMP1Q96GC9 406 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 PRRC1Q96M27 445 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 FUZQ9BT04 418 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 CACYBPQ9HB71 228 aaKnown RBP17.3■□□□□ 0.36
SMPD1-203ENST00000527275 KLHL28Q9NXS3 571 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 MGAT4BQ9UQ53 548 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 LAMA5O15230 3695 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 A0A1W2PQ72 361 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 GXYLT2A0PJZ3 443 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 TPST2O60704 377 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 LIFP15018 202 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 GSSP48637 474 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 RNF4P78317 190 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 NEDD8Q15843 81 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 TBC1D25Q3MII6 688 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 DCST2Q5T1A1 773 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 KLHL17Q6TDP4 642 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 HSDL2Q6YN16 418 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 NDUFAF7Q7L592 441 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 SLC29A4Q7RTT9 530 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 VASH2Q86V25 355 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 ENTHD1Q8IYW4 607 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 SPARTQ8N0X7 666 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 CLIP4Q8N3C7 705 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 LIN28AQ9H9Z2 209 aaKnown RBP17.3■□□□□ 0.36
SMPD1-203ENST00000527275 TPRKBQ9Y3C4 175 aa17.3■□□□□ 0.36
SMPD1-203ENST00000527275 NSG1A0A0A6YYJ2 146 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 SH3PXD2BA1X283 911 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 CDC14CA4D256 554 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 MASP2O00187 686 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 ADAP00813 363 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 PPICP45877 212 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 PIGFQ07326 219 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 GPR68Q15743 365 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 PODNL1Q6PEZ8 512 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 UCK2Q9BZX2 261 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 WWTR1Q9GZV5 400 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 ZNF350Q9GZX5 532 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 NXF5Q9H1B4 397 aaKnown RBP17.29■□□□□ 0.36
SMPD1-203ENST00000527275 ZNF160Q9HCG1 818 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 Q9N2J8 555 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 VCX3AQ9NNX9 186 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 CTPS2Q9NRF8 586 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 P4HTMQ9NXG6 502 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 SCN3BQ9NY72 215 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 RNF6Q9Y252 685 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 ZNF443Q9Y2A4 671 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-203ENST00000527275 TRBV11-1A0A0K0K1C0 115 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 OR6C76A6NM76 312 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 FRS3O43559 492 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 STX11O75558 287 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 HTR1AP08908 422 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 LARS2Q15031 903 aaKnown RBP17.29■□□□□ 0.36
SMPD1-203ENST00000527275 FIGNL1Q6PIW4 674 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 MRGPREQ86SM8 312 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 FAM81AQ8TBF8 368 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 THAP3Q8WTV1 239 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-203ENST00000527275 PRR14Q9BWN1 585 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 MAN2C1Q9NTJ4 1040 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 FBXO34Q9NWN3 711 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 PAK1IP1Q9NWT1 392 aaPredicted RBP17.29■□□□□ 0.36
SMPD1-203ENST00000527275 RSL24D1Q9UHA3 163 aaKnown RBP17.29■□□□□ 0.36
SMPD1-203ENST00000527275 OR10H1Q9Y4A9 318 aa17.29■□□□□ 0.36
SMPD1-203ENST00000527275 WBP4O75554 376 aaKnown RBP17.28■□□□□ 0.36
SMPD1-203ENST00000527275 SOX30O94993 753 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 KCNK2O95069 426 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 CELA2AP08217 269 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 JUNBP17275 347 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-203ENST00000527275 RFX3P48380 749 aa17.28■□□□□ 0.36
SMPD1-203ENST00000527275 POU6F2P78424 691 aaPredicted RBP17.28■□□□□ 0.36
SMPD1-203ENST00000527275 SRSF6Q13247 344 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms