RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 CLDN15P56746 228 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 CLDN20P56880 219 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 UFM1P61960 85 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 RPS26P62854 115 aaKnown RBP18.57■□□□□ 0.56
VPS28-206ENST00000526734 ZNF117Q03924 483 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 FOXF2Q12947 444 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 PDCD4Q53EL6 469 aaKnown RBP18.57■□□□□ 0.56
VPS28-206ENST00000526734 PDSS1Q5T2R2 415 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 NXNQ6DKJ4 435 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 HEPHL1Q6MZM0 1159 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 GCNT2Q8N0V5 402 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 GOLGA6L1Q8N7Z2 621 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 OR5M1Q8NGP8 315 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 SMPDL3BQ92485 455 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 C7orf26Q96N11 449 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 ZNF350Q9GZX5 532 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 OR51I1Q9H343 314 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 ICAM5Q9UMF0 924 aa18.57■□□□□ 0.56
VPS28-206ENST00000526734 FBN2P35556 2912 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 ANKHD1Q8IWZ3 2542 aaKnown RBP18.56■□□□□ 0.56
VPS28-206ENST00000526734 MSTNO14793 375 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 IL6P05231 212 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 LINGO3P0C6S8 592 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 UBL4AP11441 157 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 PSMA4P25789 261 aaKnown RBP18.56■□□□□ 0.56
VPS28-206ENST00000526734 MAGEA8P43361 318 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 CPA2P48052 419 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 SUCLG1P53597 346 aaKnown RBP18.56■□□□□ 0.56
VPS28-206ENST00000526734 ZNF141Q15928 474 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 SGCBQ16585 318 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.56■□□□□ 0.56
VPS28-206ENST00000526734 AP1ARQ63HQ0 302 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 ESPNLQ6ZVH7 1005 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 GGNQ86UU5 652 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 ARL8AQ96BM9 186 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 RNF145Q96MT1 663 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 OR52E6Q96RD3 313 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 PANX1Q96RD7 426 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 SLC35A5Q9BS91 424 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 RBM24Q9BX46 236 aaKnown RBP18.56■□□□□ 0.56
VPS28-206ENST00000526734 VIPAS39Q9H9C1 493 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 RNF122Q9H9V4 155 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 ZIM2Q9NZV7 527 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 GPC6Q9Y625 555 aaPredicted RBP18.56■□□□□ 0.56
VPS28-206ENST00000526734 DOCK7Q96N67 2140 aa18.56■□□□□ 0.56
VPS28-206ENST00000526734 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 SERINC4A6NH21 518 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 GJE1A6NN92 205 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 EIF1AYO14602 144 aaKnown RBP18.55■□□□□ 0.56
VPS28-206ENST00000526734 ZNF264O43296 627 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 TNFSF13O75888 250 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 NUDT14O95848 222 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 AGFG1P52594 562 aaKnown RBP18.55■□□□□ 0.56
VPS28-206ENST00000526734 PON3Q15166 354 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 MSANTD1Q6ZTZ1 278 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 HDXQ7Z353 690 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 TMEM200AQ86VY9 491 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 ZNF614Q8N883 585 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 LRRC8CQ8TDW0 803 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 FIG4Q92562 907 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 ARSGQ96EG1 525 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 TEX37Q96LM6 180 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 MCTS1Q9ULC4 181 aaKnown RBP18.55■□□□□ 0.56
VPS28-206ENST00000526734 CARD8Q9Y2G2 431 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 LRBAP50851 2863 aa18.55■□□□□ 0.56
VPS28-206ENST00000526734 KIAA1549Q9HCM3 1950 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 NPIPA5A0A0B4J1W7 369 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 TUBAL3A6NHL2 446 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 HMGB1P1B2RPK0 211 aaPredicted RBP18.54■□□□□ 0.56
VPS28-206ENST00000526734 NPIPA7E9PJI5 369 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 ADAMDEC1O15204 470 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 UBDO15205 165 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 KIAA0513O60268 411 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 SLC22A3O75751 556 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 TGDSO95455 350 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 NPIPA8P0DM63 369 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 EIF1AXP47813 144 aaKnown RBP18.54■□□□□ 0.56
VPS28-206ENST00000526734 NME5P56597 212 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 HPCAP84074 193 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 GPR68Q15743 365 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 CDH24Q86UP0 819 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 ZZZ3Q8IYH5 903 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 CLEC4FQ8N1N0 589 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 OR5W2Q8NH69 310 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 OR2V1Q8NHB1 315 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 FNDC9Q8TBE3 224 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 XAGE5Q8WWM1 108 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 ADGRG7Q96K78 797 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 MRGPRX4Q96LA9 322 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 SDR39U1Q9NRG7 319 aaPredicted RBP18.54■□□□□ 0.56
VPS28-206ENST00000526734 CRIM1Q9NZV1 1036 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 LIPT1Q9Y234 373 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 WDR45Q9Y484 360 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 USH1CQ9Y6N9 552 aa18.54■□□□□ 0.56
VPS28-206ENST00000526734 CCDC154A6NI56 674 aa18.53■□□□□ 0.56
VPS28-206ENST00000526734 A8MXE2 369 aa18.53■□□□□ 0.56
VPS28-206ENST00000526734 SHISA8B8ZZ34 492 aa18.53■□□□□ 0.56
VPS28-206ENST00000526734 H0YC42 278 aa18.53■□□□□ 0.56
VPS28-206ENST00000526734 SYNGR4O95473 234 aa18.53■□□□□ 0.56
VPS28-206ENST00000526734 OR12D1P0DN82 309 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms