RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	GCKR	Q14397	625 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SLC17A1	Q14916	467 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SGCA	Q16586	387 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	MPPE1	Q53F39	396 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ZNF311	Q5JNZ3	666 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CLVS2	Q5SYC1	327 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	BEND6	Q5SZJ8	279 aa	Predicted RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ZNF658	Q5TYW1	1059 aa	Predicted RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	PAQR6	Q6TCH4	344 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	B3GLCT	Q6Y288	498 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	WDR88	Q6ZMY6	472 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TRMT10C	Q7L0Y3	403 aa	Known RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ADAMTSL2	Q86TH1	951 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	FAM228A	Q86W67	206 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	OFCC1	Q8IZS5	231 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	PARP8	Q8N3A8	854 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CHDH	Q8NE62	594 aa	Predicted RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ZNF680	Q8NEM1	530 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SPPL2A	Q8TCT8	520 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	PAQR8	Q8TEZ7	354 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	LRRC15	Q8TF66	581 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TNFRSF14	Q92956	283 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TMA16	Q96EY4	203 aa	Known RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	EEF2KMT	Q96G04	330 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	NSMCE2	Q96MF7	247 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	RCHY1	Q96PM5	261 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ALKBH3	Q96Q83	286 aa	Predicted RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	KCNS3	Q9BQ31	491 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	EGLN1	Q9GZT9	426 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	LIME1	Q9H400	295 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	C12orf10	Q9HB07	376 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	RCOR3	Q9P2K3	495 aa	Predicted RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CTSZ	Q9UBR2	303 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	PEF1	Q9UBV8	284 aa	Known RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SLC7A8	Q9UHI5	535 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CYTH4	Q9UIA0	394 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	MUTYH	Q9UIF7	546 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	DIMT1	Q9UNQ2	313 aa	Known RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	MRPS7	Q9Y2R9	242 aa	Known RBP	3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	KLHDC2	Q9Y2U9	406 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	PTCH1	Q13635	1447 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	PTPRK	Q15262	1439 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	KIAA1107	Q9UPP5	1409 aa		3.68	□□□□□ -1.82
CTNNA1-238	ENST00000523298	MLH3	Q9UHC1	1453 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	INSR	P06213	1382 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CAMSAP1	Q5T5Y3	1602 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ANKRD30A	Q9BXX3	1397 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	EIF2AK4	Q9P2K8	1649 aa	Known RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	IGLV4-3	A0A075B6K6	122 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TMEM210	A6NLX4	147 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	GABRR3	A8MPY1	467 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TCP10L2	B9ZVM9	353 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	XPO1	O14980	1071 aa	Known RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	INPP4B	O15327	924 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TBX19	O60806	448 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	RHOBTB1	O94844	696 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	OR6A2	O95222	327 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SEMA4F	O95754	770 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	GAS8	O95995	478 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	MMP10	P09238	476 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	IQCF3	P0C7M6	154 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CT45A8	P0DMV1	189 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CT45A9	P0DMV2	189 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TUBG1	P23258	451 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	MAT2A	P31153	395 aa	Known RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	FCGR2B	P31994	310 aa	Predicted RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	FCGR2C	P31995	323 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	RANBP1	P43487	201 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SLC7A2	P52569	658 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SUCLG1	P53597	346 aa	Known RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	AIF1	P55008	147 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	STX17	P56962	302 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	FADD	Q13158	208 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CCL14	Q16627	93 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	KYAT1	Q16773	422 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	RFTN2	Q52LD8	501 aa	Predicted RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CT45A2	Q5DJT8	189 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	PAGE2B	Q5JRK9	111 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	PMF1	Q6P1K2	205 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SCYL2	Q6P3W7	929 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	REG3G	Q6UW15	175 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ADGRD2	Q7Z7M1	963 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CCDC71	Q8IV32	467 aa	Predicted RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ZNF444	Q8N0Y2	327 aa	Predicted RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ABHD12	Q8N2K0	398 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ASCC1	Q8N9N2	400 aa	Known RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	BPIFC	Q8NFQ6	507 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TTL	Q8NG68	377 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SPATA3	Q8NHX4	192 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	ANGPTL6	Q8NI99	470 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	MITD1	Q8WV92	249 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TSEN15	Q8WW01	171 aa	Known RBP	3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	TCP11	Q8WWU5	503 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	RLN3	Q8WXF3	142 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	P3H4	Q92791	437 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	SLCO4A1	Q96BD0	722 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	FAM122A	Q96E09	287 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	C12orf66	Q96MD2	445 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	GPR137	Q96N19	417 aa		3.67	□□□□□ -1.82
CTNNA1-238	ENST00000523298	CGREF1	Q99674	301 aa		3.67	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms