RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 OR7A2PQ8NGA2 310 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 FAM110BQ8TC76 370 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 HOXB13Q92826 284 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-209ENST00000522987 ZBTB8AQ96BR9 441 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 S100PBPQ96BU1 408 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 FAM120BQ96EK7 910 aaKnown RBP13.76□□□□□ -0.21
MRPS28-209ENST00000522987 KLHL15Q96M94 604 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 SIRT3Q9NTG7 399 aaPredicted RBP13.76□□□□□ -0.21
MRPS28-209ENST00000522987 WBP11Q9Y2W2 641 aaKnown RBP13.76□□□□□ -0.21
MRPS28-209ENST00000522987 KCNE3Q9Y6H6 103 aa13.76□□□□□ -0.21
MRPS28-209ENST00000522987 SONP18583 2426 aaKnown RBP13.75□□□□□ -0.21
MRPS28-209ENST00000522987 C9JVG2 144 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 NPIPB8E9PQR5 432 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 ADAMDEC1O15204 470 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 EFNA2O43921 213 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 PRPH2P23942 346 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 CCT5P48643 541 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 TNK1Q13470 666 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 TP53BP2Q13625 1128 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 CAPRIN1Q14444 709 aaKnown RBP13.75□□□□□ -0.21
MRPS28-209ENST00000522987 TOMM34Q15785 309 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-209ENST00000522987 CDC73Q6P1J9 531 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 CBLN3Q6UW01 205 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 TUSC5Q8IXB3 177 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 OR6Y1Q8NGX8 325 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 FBXO27Q8NI29 283 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 IGFBPL1Q8WX77 278 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 ZNF775Q96BV0 537 aaPredicted RBP13.75□□□□□ -0.21
MRPS28-209ENST00000522987 ZNF524Q96C55 264 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 FCRL1Q96LA6 429 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 C1orf50Q9BV19 199 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 UBQLN4Q9NRR5 601 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 ADAM21Q9UKJ8 722 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 CARD8Q9Y2G2 431 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 DNHD1Q96M86 4753 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 ALPK2Q86TB3 2170 aa13.75□□□□□ -0.21
MRPS28-209ENST00000522987 HEATR1Q9H583 2144 aaKnown RBP13.75□□□□□ -0.21
MRPS28-209ENST00000522987 PIP5K1BO14986 540 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 LSM1O15116 133 aaKnown RBP13.74□□□□□ -0.21
MRPS28-209ENST00000522987 HMGN2P05204 90 aaKnown RBP13.74□□□□□ -0.21
MRPS28-209ENST00000522987 LINGO3P0C6S8 592 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 BCKDHAP12694 445 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 PPP3CBP16298 524 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 KRT4P19013 534 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 CRHR1P34998 444 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 CDKN1AP38936 164 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 FRKP42685 505 aaPredicted RBP13.74□□□□□ -0.21
MRPS28-209ENST00000522987 OCRLQ01968 901 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 PDE7AQ13946 482 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 VEZF1Q14119 521 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 ZNF239Q16600 458 aaKnown RBP13.74□□□□□ -0.21
MRPS28-209ENST00000522987 TMEM176BQ3YBM2 270 aaPredicted RBP13.74□□□□□ -0.21
MRPS28-209ENST00000522987 TMEM201Q5SNT2 666 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 PDSS1Q5T2R2 415 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 KANK2Q63ZY3 851 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 OLIG3Q7RTU3 272 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 TMCO5AQ8N6Q1 288 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 REXO5Q96IC2 774 aaKnown RBP13.74□□□□□ -0.21
MRPS28-209ENST00000522987 TACO1Q9BSH4 297 aaKnown RBP13.74□□□□□ -0.21
MRPS28-209ENST00000522987 MECRQ9BV79 373 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 CXorf56Q9H5V9 222 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 ANKZF1Q9H8Y5 726 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 DNAJC15Q9Y5T4 150 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 ABCA1O95477 2261 aa13.74□□□□□ -0.21
MRPS28-209ENST00000522987 A0A1W2PNR3 127 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 TLDC2A0PJX2 215 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 C7orf72A4D263 438 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 RNF223E7ERA6 249 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 H3BQF6 201 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 GTPBP1O00178 669 aaKnown RBP13.73□□□□□ -0.21
MRPS28-209ENST00000522987 ZNF195O14628 629 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 PEX11AO75192 247 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 NGFRP08138 427 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 IFI6P09912 130 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 LAMP1P11279 417 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 NEFHP12036 1026 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 PTNP21246 168 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 ATP6V1C1P21283 382 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 IL32P24001 234 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 SERPINB4P48594 390 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 CCR4P51679 360 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 FAPQ12884 760 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 SPDYE7PQ495Y7 208 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.73□□□□□ -0.21
MRPS28-209ENST00000522987 TFAP2EQ6VUC0 442 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 ZCCHC23Q6ZST2 131 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 TRABD2AQ86V40 505 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 ZNF611Q8N823 705 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 OR5AK3PQ8NH89 298 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 LILRB1Q8NHL6 650 aaPredicted RBP13.73□□□□□ -0.21
MRPS28-209ENST00000522987 ACTRT2Q8TDY3 377 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 RNF128Q8TEB7 428 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 TWIST2Q8WVJ9 160 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 DNAJA3Q96EY1 480 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 BTBD2Q9BX70 525 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 IQCGQ9H095 443 aaKnown RBP13.73□□□□□ -0.21
MRPS28-209ENST00000522987 CXorf36Q9H7Y0 433 aa13.73□□□□□ -0.21
MRPS28-209ENST00000522987 ACSS1Q9NUB1 689 aaPredicted RBP13.73□□□□□ -0.21
MRPS28-209ENST00000522987 PAQR5Q9NXK6 330 aaPredicted RBP13.73□□□□□ -0.21
MRPS28-209ENST00000522987 NTMQ9P121 344 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms