RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 HIST1H2ADP20671 130 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 ATP5A1P25705 553 aaKnown RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 ABCD3P28288 659 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 CETN2P41208 172 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 MAGEA1P43355 309 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 NPY2RP49146 381 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 TMED10P49755 219 aaKnown RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 RGS4P49798 205 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 TERF1P54274 439 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 AP1S2P56377 157 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 LOXL3P58215 753 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 B3GALT5-AS1P59052 145 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 RPS13P62277 151 aaKnown RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 FOXI1Q12951 378 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 DHX34Q14147 1143 aaKnown RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 TSC22D1Q15714 1073 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 C18orf63Q68DL7 685 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 SFRP4Q6FHJ7 346 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 FAM166AQ6J272 317 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 CASC4Q6P4E1 433 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 SCIMPQ6UWF3 145 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 Q6ZNX1 250 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 TAGAPQ8N103 731 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 ZNF619Q8N2I2 560 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 CCDC89Q8N998 374 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 ACOT4Q8N9L9 421 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 BBOF1Q8ND07 529 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 SEMA6DQ8NFY4 1073 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 C1orf54Q8WWF1 131 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 HGDQ93099 445 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 S100PBPQ96BU1 408 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 MSI2Q96DH6 328 aaKnown RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 ZMYND19Q96E35 227 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 C11orf24Q96F05 449 aaPredicted RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 H2AFJQ9BTM1 129 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 PTDSS2Q9BVG9 487 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 SORBS1Q9BX66 1292 aaKnown RBP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 PINK1Q9BXM7 581 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 TOR3AQ9H497 397 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 ACTR8Q9H981 624 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 SNX15Q9NRS6 342 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.61□□□□□ -1.51
VPS13B-211ENST00000522802 PAK5Q9P286 719 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 SLC17A6Q9P2U8 582 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 KCNS2Q9ULS6 477 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 B3GALT5Q9Y2C3 310 aa5.61□□□□□ -1.51
VPS13B-211ENST00000522802 PABPN1LA6NDY0 278 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 GLOD5A6NK44 160 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 SAP18O00422 153 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 SEC14L5O43304 696 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 RAMP1O60894 148 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 ICOSLGO75144 302 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 LY6HO94772 140 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 WDR47O94967 919 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 SCELO95171 688 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 VENTXO95231 258 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 CT62P0C5K7 136 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 RHOXF2BP0C7M4 288 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 C1GALT1C1LP0DN25 315 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 SLC25A16P16260 332 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 HNF1AP20823 631 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 HIST1H1TP22492 207 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 CPN2P22792 545 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 STIP1P31948 543 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 SLC6A8P48029 635 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 SUCLG1P53597 346 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 HNRNPH2P55795 449 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 ACTG1P63261 375 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 TNFRSF17Q02223 184 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 BSPH1Q075Z2 132 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 THOC5Q13769 683 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 RCN2Q14257 317 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 SQLEQ14534 574 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 PON3Q15166 354 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 NRF1Q16656 503 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 CTU2Q2VPK5 515 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 MIDNQ504T8 468 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 NCMAPQ5T1S8 102 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 OR5M10Q6IEU7 315 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 AAGABQ6PD74 315 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 DTX2Q86UW9 622 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 GPSM1Q86YR5 675 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 ST13P4Q8IZP2 240 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 RFLNBQ8N5W9 214 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 C3orf56Q8N813 242 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 TTLQ8NG68 377 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 RIT1Q92963 219 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 ADIPOR1Q96A54 375 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 REPS1Q96D71 796 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 SORCS2Q96PQ0 1159 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 CACNG6Q9BXT2 260 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 TRIM2Q9C040 744 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 MS4A7Q9GZW8 240 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 NXF5Q9H1B4 397 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 KLRF1Q9NZS2 232 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 DKKL1Q9UK85 242 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 FBXO5Q9UKT4 447 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 CLEC4AQ9UMR7 237 aa5.6□□□□□ -1.51
VPS13B-211ENST00000522802 EXO1Q9UQ84 846 aaKnown RBP5.6□□□□□ -1.51
VPS13B-211ENST00000522802 COMMD10Q9Y6G5 202 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms