RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 B3GNT7Q8NFL0 401 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 OR4F17Q8NGA8 305 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 OR52I1Q8NGK6 324 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 OR4F5Q8NH21 305 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 UBA3Q8TBC4 463 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 CNIH3Q8TBE1 160 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 HSD17B8Q92506 261 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 NR4A3Q92570 626 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 TANKQ92844 425 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 CPB2Q96IY4 423 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 TXNDC15Q96J42 360 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 WWC2-AS2Q96NR7 200 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 OR4F4Q96R69 305 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 MLST8Q9BVC4 326 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 OSBPL10Q9BXB5 764 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 POTEKPQ9BYX7 375 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 COMMD4Q9H0A8 199 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 ZNF703Q9H7S9 590 aaPredicted RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 SDR39U1Q9NRG7 319 aaPredicted RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 RBAKQ9NYW8 714 aaPredicted RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 SLC17A7Q9P2U7 560 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 ZNF221Q9UK13 617 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 GRIN2DO15399 1336 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 FRMPD4Q14CM0 1322 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 PDS5AQ29RF7 1337 aaKnown RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 ADAMTS20P59510 1910 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 IGHV4-28A0A0C4DH34 117 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 A0A1B0GUS0 222 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ANHXE9PGG2 379 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 TOR1AO14656 332 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 RAB29O14966 203 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 EPHB6O15197 1021 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 MSH4O15457 936 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 COCHO43405 550 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 TRAPPC3O43617 180 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 GMDSO60547 372 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 OR5F1O95221 314 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 SP1P08047 785 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ANXA5P08758 320 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 HOXC6P09630 235 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 HKR1P10072 659 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 IMPDH1P20839 514 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 RFX3P48380 749 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 RFX5P48382 616 aaPredicted RBP3.53□□□□□ -1.84
SKP1-209ENST00000522552 RASSF2P50749 326 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 GAS1P54826 345 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 BRWD1-AS2P59051 145 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ZP1P60852 638 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 B2MP61769 119 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 TSPAN5P62079 268 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ERVK-25P63136 954 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 TRAF1Q13077 416 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 SLAMF1Q13291 335 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ITPK1Q13572 414 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 CYTH1Q15438 398 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ZNF74Q16587 644 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 LSM12Q3MHD2 195 aaKnown RBP3.53□□□□□ -1.84
SKP1-209ENST00000522552 CCDC14Q49A88 953 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 DMRTC1Q5HYR2 192 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 CDKL4Q5MAI5 379 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 DCAF10Q5QP82 559 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 CYS1Q717R9 158 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 UTS2BQ765I0 119 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 SLC35D2Q76EJ3 337 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 SLC16A14Q7RTX9 510 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ERICH1Q86X53 443 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ARHGAP18Q8N392 663 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 MARVELD2Q8N4S9 558 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 CCDC185Q8N715 623 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 OR4F6Q8NGB9 312 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 OR10A7Q8NGE5 316 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 OR8J2Q8NGG1 315 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 OR52E5Q8NH55 327 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 C8orf46Q8TAG6 207 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 FAM76AQ8TAV0 307 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ART4Q93070 314 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 NUS1Q96E22 293 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 CHMP6Q96FZ7 201 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 PLEKHA8Q96JA3 519 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 NSMCE3Q96MG7 304 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 NAPGQ99747 312 aaPredicted RBP3.53□□□□□ -1.84
SKP1-209ENST00000522552 TMEM121Q9BTD3 319 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 NEUROG2Q9H2A3 272 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 POPDC2Q9HBU9 364 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 PRSS16Q9NQE7 514 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 PARPBPQ9NWS1 579 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 DUS2Q9NX74 493 aaKnown RBP3.53□□□□□ -1.84
SKP1-209ENST00000522552 DCDC2Q9UHG0 476 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 ATPIF1Q9UII2 106 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 PURGQ9UJV8 347 aaKnown RBP3.53□□□□□ -1.84
SKP1-209ENST00000522552 PSMD13Q9UNM6 376 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 MMP24Q9Y5R2 645 aa3.53□□□□□ -1.84
SKP1-209ENST00000522552 PUS1Q9Y606 427 aaKnown RBP eCLIP3.53□□□□□ -1.84
SKP1-209ENST00000522552 LOC101059948A0A1B0GTJ6 334 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 A0A1B0GW15 77 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 A0A1W2PQ72 361 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 CYB561D2O14569 222 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 RFXANKO14593 260 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 ZNF195O14628 629 aa3.52□□□□□ -1.85
SKP1-209ENST00000522552 MGST3O14880 152 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms