RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CHFRQ96EP1 664 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 ATOH8Q96SQ7 321 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 SYT11Q9BT88 431 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 KCNN3Q9UGI6 736 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 FBXL3Q9UKT7 428 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 MAB21L2Q9Y586 359 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 RAB3BP20337 219 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 FOXA1P55317 472 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 PRSS48Q7RTY5 328 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 FAM71F1Q96KD3 344 aaPredicted RBP15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 SLC6A18Q96N87 628 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 HINT2Q9BX68 163 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 TXLNGYQ9BZA5 131 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 CNIH4Q9P003 139 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 IL20RAQ9UHF4 553 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 UBR2Q8IWV8 1755 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 NPIPA5A0A0B4J1W7 369 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 CDC14CA4D256 554 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 NPIPA7E9PJI5 369 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 IGHG1P01857 330 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 NPIPA8P0DM63 369 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 ADRA1AP35348 466 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 ELMOD2Q8IZ81 293 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 OR51L1Q8NGJ5 315 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 BPIFA2Q96DR5 249 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 ATP13A2Q9NQ11 1180 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 GPR52Q9Y2T5 361 aa15.25■□□□□ 0.03
PCDHA3-201ENST00000522353 MPPED1O15442 326 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 GPR39O43194 453 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 RP2O75695 350 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 ATXN7L3Q14CW9 347 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 TMEM205Q6UW68 189 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 METTL4Q8N3J2 472 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 ULBP2Q9BZM5 246 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 TWSG1Q9GZX9 223 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 ARMC1Q9NVT9 282 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 DHRS4L1P0CG22 281 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 TNFRSF1BP20333 461 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 MYF6P23409 242 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 TPMTP51580 245 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 SNTB2Q13425 540 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 GPR148Q8TDV2 347 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 WDR83Q9BRX9 315 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 SEMA6CQ9H3T2 930 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 MMACHCQ9Y4U1 282 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 CITO14578 2027 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 KCNJ10P78508 379 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 TNFRSF17Q02223 184 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 ZP2Q05996 745 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 C5orf46Q6UWT4 87 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 KIAA0907Q7Z7F0 614 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 CYB561A3Q8NBI2 242 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 PAPD5Q8NDF8 572 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 OR1J4Q8NGS1 313 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 OR7D2Q96RA2 312 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 INTS14Q96SY0 518 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 TBCCD1Q9NVR7 557 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 USP36Q9P275 1121 aaKnown RBP15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 EMC9Q9Y3B6 208 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF337Q9Y3M9 751 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 GLSO94925 669 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 PAGE3Q5JUK9 113 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF578Q96N58 590 aaPredicted RBP15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 SMIM14Q96QK8 99 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 ABCG5Q9H222 651 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 R3HDMLQ9H3Y0 253 aa15.24■□□□□ 0.03
PCDHA3-201ENST00000522353 C12orf71A8MTZ7 269 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 FRS3O43559 492 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 KIAA1024LP59773 190 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 CHRNEQ04844 493 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 PLGLAQ15195 96 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF791Q3KP31 576 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 PLPP6Q8IY26 295 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 RSC1A1Q92681 617 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 TBX21Q9UL17 535 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 RP1L1Q8IWN7 2480 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 LAMB4A4D0S4 1761 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 I3L521 148 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 ERV3-1Q14264 604 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 TAZQ16635 292 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 DTWD1Q8N5C7 304 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 OR13H1Q8NG92 308 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 AIFM1O95831 613 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 ATF4P18848 351 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 GPR18Q14330 331 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 GGTA1PQ4G0N0 100 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 C14orf28Q4W4Y0 310 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 TMEM244Q5VVB8 128 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 PAPD4Q6PIY7 484 aaKnown RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 PCDHGA7Q9Y5G6 932 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 NUP98P52948 1817 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 H0YIV9 168 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF264O43296 627 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 MRPS14O60783 128 aaKnown RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 LCKP06239 509 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 CHMP24386 653 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF81P51508 661 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 CMPK2Q5EBM0 449 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 RTN4RL1Q86UN2 441 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms