RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 A0A087WZY1 265 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 TMEM110-MUSTN1A8MSY1 372 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 VGLL3A8MV65 326 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 DIRAS3O95661 229 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 CSF2P04141 144 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 STSP08842 583 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 CALCBP10092 127 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 SERPINA2P20848 420 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 EPHX2P34913 555 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 ATXN7L3Q14CW9 347 aaPredicted RBP3.6□□□□□ -1.83
SKP1-208ENST00000521216 LINC01620Q4KN68 170 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 CCDC92Q53HC0 331 aaPredicted RBP3.6□□□□□ -1.83
SKP1-208ENST00000521216 CELF3Q5SZQ8 465 aaKnown RBP3.6□□□□□ -1.83
SKP1-208ENST00000521216 SCARA5Q6ZMJ2 495 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 ANKRD37Q7Z713 158 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 TMEM110Q86TL2 294 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 NEIL2Q969S2 332 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 FGGYQ96C11 551 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 OR5B2Q96R09 309 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 DPH5Q9H2P9 285 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 ASB8Q9H765 288 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 WDR76Q9H967 626 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 ANAPC7Q9UJX3 599 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 B9D1Q9UPM9 204 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 AURKCQ9UQB9 309 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 MAB21L2Q9Y586 359 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 SYNRGQ9UMZ2 1314 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 CARMIL1Q5VZK9 1371 aa3.6□□□□□ -1.83
SKP1-208ENST00000521216 A0A1B0GUL7 405 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 TUBAL3A6NHL2 446 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 H0Y9J4 135 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 H3BMQ9 156 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 K7ENP7 123 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 CTAGE5O15320 804 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 EFNA2O43921 213 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 LYPLA1O75608 230 aaPredicted RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 B3GALNT1O75752 331 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 AK1P00568 194 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 CCDC172P0C7W6 258 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 CLUP10909 449 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 NCF1P14598 390 aaPredicted RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 CALB2P22676 271 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 RBMXP38159 391 aaKnown RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 CD151P48509 253 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 BPIFB3P59826 476 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 OTUD4Q01804 1114 aaKnown RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 OC90Q02509 493 aaPredicted RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 SPATA46Q5T0L3 261 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 ACSM5Q6NUN0 579 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 APTXQ7Z2E3 356 aaKnown RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 DPY19L4Q7Z388 723 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 ZNF589Q86UQ0 364 aaPredicted RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 TMEM17Q86X19 198 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 ZNF100Q8IYN0 542 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 LINC01561Q8N1V8 128 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 MYCBPQ99417 103 aaPredicted RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 ZNF184Q99676 751 aaPredicted RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 SLC30A2Q9BRI3 323 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 NICN1Q9BSH3 213 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 CCDC94Q9BW85 323 aaPredicted RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 PPDPFQ9H3Y8 114 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 SUDS3Q9H7L9 328 aaPredicted RBP3.59□□□□□ -1.83
SKP1-208ENST00000521216 NYAP2Q9P242 653 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 SPACA6W5XKT8 324 aa3.59□□□□□ -1.83
SKP1-208ENST00000521216 CHD4Q14839 1912 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 RGSL1A5PLK6 1076 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 FAM231BA6NCW3 169 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 ZNF853P0CG23 659 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 PDHBP11177 359 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 NTSP30990 170 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 ELAVL3Q14576 367 aaKnown RBP3.58□□□□□ -1.84
SKP1-208ENST00000521216 AANATQ16613 207 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 NDUFA9Q16795 377 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 C2orf83Q53S99 150 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 CBLN3Q6UW01 205 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 DNM1P46Q6ZS02 220 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 ERI1Q8IV48 349 aaKnown RBP3.58□□□□□ -1.84
SKP1-208ENST00000521216 CENPLQ8N0S6 344 aaPredicted RBP3.58□□□□□ -1.84
SKP1-208ENST00000521216 MTURNQ8N3F0 131 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 SETD7Q8WTS6 366 aaKnown RBP3.58□□□□□ -1.84
SKP1-208ENST00000521216 CYP2S1Q96SQ9 504 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 ANAPC11Q9NYG5 84 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 TAS2R3Q9NYW6 316 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 RIMS3Q9UJD0 308 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 UBQLN1Q9UMX0 589 aaKnown RBP3.58□□□□□ -1.84
SKP1-208ENST00000521216 SMC3Q9UQE7 1217 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 MFHAS1Q9Y4C4 1052 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 USP16Q9Y5T5 823 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 RAD50Q92878 1312 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 KIF16BQ96L93 1317 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 SCRIBQ14160 1630 aa3.58□□□□□ -1.84
SKP1-208ENST00000521216 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
SKP1-208ENST00000521216 CLDN3O15551 220 aa3.57□□□□□ -1.84
SKP1-208ENST00000521216 EMC8O43402 210 aa3.57□□□□□ -1.84
SKP1-208ENST00000521216 F10P00742 488 aa3.57□□□□□ -1.84
SKP1-208ENST00000521216 CHRNA1P02708 482 aa3.57□□□□□ -1.84
SKP1-208ENST00000521216 ELK1P19419 428 aa3.57□□□□□ -1.84
SKP1-208ENST00000521216 PSMA2P25787 234 aa3.57□□□□□ -1.84
SKP1-208ENST00000521216 PRRC2AP48634 2157 aaKnown RBP3.57□□□□□ -1.84
SKP1-208ENST00000521216 RIPPLY3P57055 190 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms