RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 KCNE3Q9Y6H6 103 aa18.09■□□□□ 0.49
PABPC1-217ENST00000521067 FBN1P35555 2871 aaKnown RBP18.09■□□□□ 0.49
PABPC1-217ENST00000521067 NPIPA5A0A0B4J1W7 369 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 NPIPA7E9PJI5 369 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 TRIM13O60858 407 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 NPIPA8P0DM63 369 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 LAMP1P11279 417 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 NEFHP12036 1026 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 PSMB1P20618 241 aaKnown RBP18.08■□□□□ 0.48
PABPC1-217ENST00000521067 LCN1P31025 176 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 SFTPDP35247 375 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 POU6F2P78424 691 aaPredicted RBP18.08■□□□□ 0.48
PABPC1-217ENST00000521067 ZNF117Q03924 483 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 LASP1Q14847 261 aaKnown RBP18.08■□□□□ 0.48
PABPC1-217ENST00000521067 MLC1Q15049 377 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 TSC22D1Q15714 1073 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 LRIG3Q6UXM1 1119 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 NUFIP2Q7Z417 695 aaKnown RBP18.08■□□□□ 0.48
PABPC1-217ENST00000521067 LILRB1Q8NHL6 650 aaPredicted RBP18.08■□□□□ 0.48
PABPC1-217ENST00000521067 RAB3IL1Q8TBN0 382 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 ABHD3Q8WU67 409 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 UBLCP1Q8WVY7 318 aaPredicted RBP18.08■□□□□ 0.48
PABPC1-217ENST00000521067 JADE3Q92613 823 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 CDS1Q92903 461 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 KLHL15Q96M94 604 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 BTBD2Q9BX70 525 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 IQCGQ9H095 443 aaKnown RBP18.08■□□□□ 0.48
PABPC1-217ENST00000521067 ZCCHC3Q9NUD5 404 aaKnown RBP18.08■□□□□ 0.48
PABPC1-217ENST00000521067 GIN1Q9NXP7 522 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 ATP6V1HQ9UI12 483 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 GPR52Q9Y2T5 361 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 TMED5Q9Y3A6 229 aa18.08■□□□□ 0.48
PABPC1-217ENST00000521067 UQCRHLA0A096LP55 91 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 SCDO00767 359 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 GCM2O75603 506 aaPredicted RBP18.07■□□□□ 0.48
PABPC1-217ENST00000521067 FGF4P08620 206 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 HPGDP15428 266 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 SERPINB4P48594 390 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 FOXF1Q12946 379 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 TOMM34Q15785 309 aaPredicted RBP18.07■□□□□ 0.48
PABPC1-217ENST00000521067 ZNF239Q16600 458 aaKnown RBP18.07■□□□□ 0.48
PABPC1-217ENST00000521067 KLHL26Q53HC5 615 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.07■□□□□ 0.48
PABPC1-217ENST00000521067 MISPQ8IVT2 679 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 ZNF611Q8N823 705 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 MTERF3Q96E29 417 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 MDFIQ99750 246 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 PIGUQ9H490 435 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 HHATLQ9HCP6 504 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 DUSP22Q9NRW4 184 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 TRAF6Q9Y4K3 522 aa18.07■□□□□ 0.48
PABPC1-217ENST00000521067 ATRQ13535 2644 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 FREM1Q5H8C1 2179 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 INAFM1C9JVW0 142 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 HS3ST1O14792 307 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 PIP5K1BO14986 540 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 TUBBP07437 444 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 ME2P23368 584 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 ALDH3A1P30838 453 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 ASMTP46597 345 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 NDUFAF6Q330K2 333 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 ARL13AQ5H913 290 aaPredicted RBP18.06■□□□□ 0.48
PABPC1-217ENST00000521067 ALKBH2Q6NS38 261 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 TUSC5Q8IXB3 177 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 DDIASQ8IXT1 998 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 GABRG1Q8N1C3 465 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 FBXO27Q8NI29 283 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 PHOSPHO1Q8TCT1 267 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 RNF128Q8TEB7 428 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 TMEM171Q8WVE6 324 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 TWIST2Q8WVJ9 160 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 AKAP1Q92667 903 aaKnown RBP eCLIP18.06■□□□□ 0.489e-8■■□□□ 13.6
PABPC1-217ENST00000521067 S100PBPQ96BU1 408 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 STACQ99469 402 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 TRMOQ9BU70 441 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 OR10A4Q9H209 315 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 CXorf36Q9H7Y0 433 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 ICAM5Q9UMF0 924 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 CARD8Q9Y2G2 431 aa18.06■□□□□ 0.48
PABPC1-217ENST00000521067 SONP18583 2426 aaKnown RBP18.06■□□□□ 0.48
PABPC1-217ENST00000521067 COL6A5A8TX70 2615 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 KIF2AO00139 706 aaPredicted RBP18.05■□□□□ 0.48
PABPC1-217ENST00000521067 ZNF195O14628 629 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 SCAMP2O15127 329 aaKnown RBP18.05■□□□□ 0.48
PABPC1-217ENST00000521067 ARRB2P32121 409 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 NR1H2P55055 460 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 TMEM176BQ3YBM2 270 aaPredicted RBP18.05■□□□□ 0.48
PABPC1-217ENST00000521067 PDSS1Q5T2R2 415 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 CDC73Q6P1J9 531 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 TFAP2EQ6VUC0 442 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 R3HCC1LQ7Z5L2 792 aaKnown RBP18.05■□□□□ 0.48
PABPC1-217ENST00000521067 ATG4DQ86TL0 474 aaPredicted RBP18.05■□□□□ 0.48
PABPC1-217ENST00000521067 STK32CQ86UX6 486 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 C3orf30Q96M34 536 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 MECRQ9BV79 373 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 ANKZF1Q9H8Y5 726 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 GPATCH2Q9NW75 528 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 SNX8Q9Y5X2 465 aa18.05■□□□□ 0.48
PABPC1-217ENST00000521067 NUP214P35658 2090 aaPredicted RBP18.05■□□□□ 0.48
PABPC1-217ENST00000521067 CADP27708 2225 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms