RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 SP140LQ9H930 580 aa23.82■■□□□ 1.4
COL13A1-213ENST00000520267 LMAN1LQ9HAT1 526 aa23.82■■□□□ 1.4
COL13A1-213ENST00000520267 DTX4Q9Y2E6 619 aa23.82■■□□□ 1.4
COL13A1-213ENST00000520267 OR2W5A6NFC9 320 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 MSL3P1P0C860 447 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 RNH1P13489 461 aaKnown RBP23.81■■□□□ 1.4
COL13A1-213ENST00000520267 HTRA1Q92743 480 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 RIT1Q92963 219 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 H2AFY2Q9P0M6 372 aaPredicted RBP23.81■■□□□ 1.4
COL13A1-213ENST00000520267 BHLHE40O14503 412 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 RGS5O15539 181 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 MBTPS2O43462 519 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 CD300CQ08708 224 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 CDC20Q12834 499 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 STX4Q12846 297 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 AMZ1Q400G9 498 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 B3GLCTQ6Y288 498 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 BPIFA2Q96DR5 249 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 FLRT3Q9NZU0 649 aa23.81■■□□□ 1.4
COL13A1-213ENST00000520267 CHURC1-FNTBB4DL54 471 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 SRPX2O60687 465 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-213ENST00000520267 ADAM11O75078 769 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 CSF2P04141 144 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 SRFP11831 508 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 BTG2P78543 158 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 DSG2Q14126 1118 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 SLC35F1Q5T1Q4 408 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 PLBD1Q6P4A8 553 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 OR13C2Q8NGS9 318 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 LMX1AQ8TE12 382 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 ASB15Q8WXK1 588 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 SLC25A46Q96AG3 418 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 PTCHD1Q96NR3 888 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 ZNF559Q9BR84 538 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 MED20Q9H944 212 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 TMEM27Q9HBJ8 222 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 MEPEQ9NQ76 525 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-213ENST00000520267 LOC110117498-PIK3R3F6TDL0 507 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 RFPL3O75679 317 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 IL1AP01583 271 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 IGHA1P01876 353 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 CRTC2Q53ET0 693 aaPredicted RBP23.8■■□□□ 1.4
COL13A1-213ENST00000520267 SMARCD3Q6STE5 483 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 THSD4Q6ZMP0 1018 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 QSOX2Q6ZRP7 698 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 SIRT6Q8N6T7 355 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 OR52L1Q8NGH7 329 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 RBM18Q96H35 190 aaKnown RBP23.8■■□□□ 1.4
COL13A1-213ENST00000520267 SLC2A4RGQ9NR83 387 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 ERVK13-1Q9NX77 482 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 MED31Q9Y3C7 131 aa23.8■■□□□ 1.4
COL13A1-213ENST00000520267 ZC3H12DA2A288 527 aaKnown RBP23.79■■□□□ 1.4
COL13A1-213ENST00000520267 HRO43593 1189 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 CTNSO60931 367 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 PROS1P07225 676 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 CAPZBP47756 277 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 FASLGP48023 281 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 FABP5Q01469 135 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 DBPQ10586 325 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-213ENST00000520267 ZNHIT3Q15649 155 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-213ENST00000520267 ZNF791Q3KP31 576 aaPredicted RBP23.79■■□□□ 1.4
COL13A1-213ENST00000520267 ZNF613Q6PF04 617 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 TMPRSS11FQ6ZWK6 438 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 ZNF687Q8N1G0 1237 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 TCTN2Q96GX1 697 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 SECISBP2Q96T21 854 aaKnown RBP23.79■■□□□ 1.4
COL13A1-213ENST00000520267 C14orf105Q9NVL8 296 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 SLC30A4O14863 429 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 SPNP16150 400 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 BMP7P18075 431 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 MAOBP27338 520 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 ATP6V1E1P36543 226 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 ELOCQ15369 112 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 GARNL3Q5VVW2 1013 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 LAX1Q8IWV1 398 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 SYT14Q8NB59 555 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 NACC2Q96BF6 587 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 VSTM2LQ96N03 204 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 PRTFDC1Q9NRG1 225 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 DNAJB12Q9NXW2 375 aaKnown RBP23.79■■□□□ 1.4
COL13A1-213ENST00000520267 FBXL21Q9UKT6 434 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 CA14Q9ULX7 337 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 CLDN16Q9Y5I7 305 aa23.79■■□□□ 1.4
COL13A1-213ENST00000520267 SYNDIG1LA6NDD5 238 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 ZNF217O75362 1048 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 SNX4O95219 450 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 GABRA5P31644 462 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 SDC2P34741 201 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 PSPHP78330 225 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 RUNX1T1Q06455 604 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 NPSR1Q6W5P4 371 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 CDK20Q8IZL9 346 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 LNX2Q8N448 690 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 KLHL36Q8N4N3 616 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 FAM174AQ8TBP5 190 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 SPACA7Q96KW9 195 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 KCTD7Q96MP8 289 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 HCAR1Q9BXC0 346 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 CPNE5Q9HCH3 593 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 TNFRSF10DQ9UBN6 386 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms