RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 LRATO95237 230 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 ZNF883P0CG24 379 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 PNMTP11086 282 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 CD80P33681 288 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 P2RY1P47900 373 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 HMGCS2P54868 508 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 RPL23AP62750 156 aaKnown RBP4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 VLDLRP98155 873 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 FGL1Q08830 312 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 SLC10A1Q14973 349 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 CCDC80Q76M96 950 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 TMEM123Q8N131 208 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 LINC01561Q8N1V8 128 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 TRPV1Q8NER1 839 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 VN1R17PQ8TDU5 208 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 BADQ92934 168 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 TOMM40LQ969M1 308 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 NT5C3BQ969T7 300 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 TUBGCP3Q96CW5 907 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 OR5B2Q96R09 309 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 NPAS2Q99743 824 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 RAB18Q9NP72 206 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 ARMCX1Q9P291 453 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 STYXL1Q9Y6J8 313 aa4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 TCF20Q9UGU0 1960 aaKnown RBP4.16□□□□□ -1.74
HMGB1P46-201ENST00000520062 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 EFCAB7A8K855 629 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 B4DXG7 233 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 E9PAM4 449 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 G3V4G9 280 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 PI15O43692 258 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 UGT2B17O75795 530 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 HPP00738 406 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 CA1P00915 261 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 PIGRP01833 764 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 TPM2P07951 284 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 HSMCR30P0CW71 290 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 LAMP1P11279 417 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 GCFC2P16383 781 aaKnown RBP4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 EFNA3P52797 238 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 KCNJ11Q14654 390 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 TIGITQ495A1 244 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 CCDC183Q5T5S1 534 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 BEND3Q5T5X7 828 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 ZSCAN25Q6NSZ9 544 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 KCNIP4Q6PIL6 250 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 STXBP4Q6ZWJ1 553 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 HIPK1Q86Z02 1210 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 KRTAP7-1Q8IUC3 87 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 CSNK1A1LQ8N752 337 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 Q8N9G6 341 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 OR5D13Q8NGL4 314 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 PPP1R16AQ96I34 528 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 CNDP1Q96KN2 507 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 MCCC1Q96RQ3 725 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 NIPSNAP3BQ9BS92 247 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 PARD6BQ9BYG5 372 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 MAGT1Q9H0U3 335 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 NXF5Q9H1B4 397 aaKnown RBP4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 LRRN3Q9H3W5 708 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 PNO1Q9NRX1 252 aaKnown RBP4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 HYPKQ9NX55 129 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 CDH9Q9ULB4 789 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 SCML2Q9UQR0 700 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 USP16Q9Y5T5 823 aa4.15□□□□□ -1.75
HMGB1P46-201ENST00000520062 IGKV3D-15A0A087WSY6 115 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 TRAV9-2A0A087WT02 112 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 IGHV2-70DA0A0C4DH43 119 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 XKRY2A2RUG3 117 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 PP2D1A8MPX8 630 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 FCMRO60667 390 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 SRPX2O60687 465 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 VENTXO95231 258 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 SLC2A10O95528 541 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 SERPINA2P20848 420 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 MMP11P24347 488 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 NMT1P30419 496 aaKnown RBP4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 CCT3P49368 545 aaKnown RBP4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 CASP4P49662 377 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 VEGFCP49767 419 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 METTL11BQ5VVY1 283 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 WSCD1Q658N2 575 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 CCDC50Q8IVM0 306 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 C9orf40Q8IXQ3 194 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 CLEC4FQ8N1N0 589 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 POM121L12Q8N7R1 296 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 OR2T33Q8NG76 320 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 OR5L2Q8NGL0 311 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 OR8J1Q8NGP2 316 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 TRUB1Q8WWH5 349 aaKnown RBP4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 TPD52L3Q96J77 140 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 NPY6RQ99463 290 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 SOSTQ9BQB4 213 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 ELOVL4Q9GZR5 314 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 GLT8D2Q9H1C3 349 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 SLC17A5Q9NRA2 495 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 NUDT15Q9NV35 164 aa4.14□□□□□ -1.75
HMGB1P46-201ENST00000520062 SIGLEC8Q9NYZ4 499 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms