RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 RXFP3Q9NSD7 469 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 ABCA3Q99758 1704 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 H0YGG7 62 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 RBBP9O75884 186 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 HCKP08631 526 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 EN2P19622 333 aaPredicted RBP10.96□□□□□ -0.65
SYNPO-204ENST00000519664 APEX1P27695 318 aaKnown RBP10.96□□□□□ -0.65
SYNPO-204ENST00000519664 SLC6A12P48065 614 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 ARF3P61204 181 aaPredicted RBP10.96□□□□□ -0.65
SYNPO-204ENST00000519664 SGCBQ16585 318 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 GXYLT1Q4G148 440 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 MRPL2Q5T653 305 aaKnown RBP10.96□□□□□ -0.65
SYNPO-204ENST00000519664 FAM83HQ6ZRV2 1179 aaPredicted RBP10.96□□□□□ -0.65
SYNPO-204ENST00000519664 FCAMRQ8WWV6 532 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 TAAR2Q9P1P5 351 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 UBQLN2Q9UHD9 624 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 SH2B3Q9UQQ2 575 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 RASD1Q9Y272 281 aa10.96□□□□□ -0.65
SYNPO-204ENST00000519664 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.96□□□□□ -0.65
SYNPO-204ENST00000519664 OR5K4A6NMS3 321 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 TRAPPC6AO75865 159 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 CCNOP22674 350 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 GPR143P51810 404 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 PRKXP51817 358 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 CSNK1G2P78368 415 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 FGFBP1Q14512 234 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 RAB30Q15771 203 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 DCST2Q5T1A1 773 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 FAM71E1Q6IPT2 247 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ZNF227Q86WZ6 799 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 CELF2-AS1Q8N7Q2 184 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 OR5W2Q8NH69 310 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 C4orf36Q96KX1 117 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 AMDHD1Q96NU7 426 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 DPCDQ9BVM2 203 aaPredicted RBP10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ATG5Q9H1Y0 275 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 PLATP00750 562 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 XCR1P46094 333 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 SMCO1Q147U7 214 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ZMYND11Q15326 602 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ACSM3Q53FZ2 586 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ARHGAP11AQ6P4F7 1023 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 POGLUT1Q8NBL1 392 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 VN1R2Q8NFZ6 395 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 PATE1Q8WXA2 126 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ASB15Q8WXK1 588 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 GAL3ST3Q96A11 431 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 HYLS1Q96M11 299 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 HHIPQ96QV1 700 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ORAI3Q9BRQ5 295 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ZDHHC5Q9C0B5 715 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 SPNS1Q9H2V7 528 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 CPNE7Q9UBL6 633 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 MED16Q9Y2X0 877 aa10.96□□□□□ -0.66
SYNPO-204ENST00000519664 ICE1Q9Y2F5 2266 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 A0A1W2PPL8 197 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 MEIOCA2RUB1 952 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 MEIS3P1A6NDR6 274 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 CLDN24A6NM45 220 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 KIAA0355O15063 1070 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 TMPRSS11DO60235 418 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 SULT1C4O75897 302 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 NDUFB2O95178 105 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 S1PR1P21453 382 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 ELAVL4P26378 380 aaKnown RBP10.95□□□□□ -0.66
SYNPO-204ENST00000519664 PKLRP30613 574 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 RFPL4BQ6ZWI9 263 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-204ENST00000519664 C12orf40Q86WS4 652 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 PLCZ1Q86YW0 608 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 SPAG16Q8N0X2 631 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 MS4A15Q8N5U1 240 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 TOE1Q96GM8 510 aaKnown RBP10.95□□□□□ -0.66
SYNPO-204ENST00000519664 SERINC2Q96SA4 455 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 SAV1Q9H4B6 383 aaPredicted RBP10.95□□□□□ -0.66
SYNPO-204ENST00000519664 MED11Q9P086 117 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 UPB1Q9UBR1 384 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 NTNG1Q9Y2I2 539 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 A6NL46 340 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 GPR89AB7ZAQ6 455 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 ZNF878C9JN71 531 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 H3BML4 177 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 SLC19A2O60779 497 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
SYNPO-204ENST00000519664 GABARAPO95166 117 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 PROS1P07225 676 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 GPR89BP0CG08 455 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 LCN1P31025 176 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 RPS25P62851 125 aaKnown RBP10.95□□□□□ -0.66
SYNPO-204ENST00000519664 ACTC1P68032 377 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 ACTA1P68133 377 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 INAVAQ3KP66 663 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 SLC46A3Q7Z3Q1 461 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 GRAMD2AQ8IUY3 354 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 GALNT11Q8NCW6 608 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 ZDHHC12Q96GR4 267 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 PPIL3Q9H2H8 161 aaKnown RBP10.95□□□□□ -0.66
SYNPO-204ENST00000519664 RNF121Q9H920 327 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 FGF22Q9HCT0 170 aa10.95□□□□□ -0.66
SYNPO-204ENST00000519664 ACSS1Q9NUB1 689 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms