RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 PRPF4BQ13523 1007 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 KCNJ11Q14654 390 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PPA1Q15181 289 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 TSTQ16762 297 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GPAT3Q53EU6 434 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 AGKQ53H12 422 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 IGSF11Q5DX21 431 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 KIAA2026Q5HYC2 2103 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 FAM46CQ5VWP2 391 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZNF470Q6ECI4 717 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 FRMPD2BQ6IN97 320 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ACAD10Q6JQN1 1059 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZFP1Q6P2D0 407 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 C16orf87Q6PH81 154 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CASP12Q6UXS9 341 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZNF620Q6ZNG0 422 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 Q6ZRU5 148 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CENPVQ7Z7K6 275 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 LUZP1Q86V48 1076 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PARGQ86W56 976 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 FAM219AQ8IW50 185 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PEX5LQ8IYB4 626 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 DIS3L2Q8IYB7 885 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 FAM71AQ8IYT1 594 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GUF1Q8N442 669 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RYBPQ8N488 228 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 KIR3DL3Q8N743 410 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZNF645Q8N7E2 425 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 DNAAF3Q8N9W5 541 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 SIDT2Q8NBJ9 832 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ICA1LQ8NDH6 482 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 OR9A1PQ8NGU1 263 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 LINC01560Q8TB33 94 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 SETD6Q8TBK2 473 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CKAP2Q8WWK9 683 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ATP6V0A1Q93050 837 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RRP36Q96EU6 259 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 WDR34Q96EX3 536 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 LTV1Q96GA3 475 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PGAM5Q96HS1 289 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 NARS2Q96I59 477 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GPR137Q96N19 417 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZFP3Q96NJ6 502 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 WFIKKN1Q96NZ8 548 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 DDX50Q9BQ39 737 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RHOXF2Q9BQY4 288 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PAGR1Q9BTK6 254 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ITPAQ9BY32 194 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 FRMD8P1Q9BZ68 369 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 GCOM2Q9BZD3 368 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RAB34Q9BZG1 259 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 POLR2J2Q9GZM3 115 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 DDX47Q9H0S4 455 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 POLR2J3Q9H1A7 115 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 MUC13Q9H3R2 512 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ST6GALNAC4Q9H4F1 302 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ANKZF1Q9H8Y5 726 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CNOT10Q9H9A5 744 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CAB39LQ9H9S4 337 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 NEK6Q9HC98 313 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZFP14Q9HCL3 533 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 OLAHQ9NV23 265 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 FAM206AQ9NX38 181 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 HOXC10Q9NYD6 342 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ZNF226Q9NYT6 803 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ANKMY1Q9P2S6 941 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 TRMT6Q9UJA5 497 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RIMS3Q9UJD0 308 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ARHGAP26Q9UNA1 814 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PTRH2Q9Y3E5 179 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ATG4BQ9Y4P1 393 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 PCDHGA1Q9Y5H4 931 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 F11RQ9Y624 299 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 TMEM14AQ9Y6G1 99 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 USH2AO75445 5202 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 CACNA1BQ00975 2339 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 SCN4AP35499 1836 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 TTC21BQ7Z4L5 1316 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 ADGRA3Q8IWK6 1321 aa-0.66□□□□□ -2.52
SNORA40.17-201ENST00000517256 RYR1P21817 5038 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 CARMIL3Q8ND23 1372 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 CADPSQ9ULU8 1353 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 MDC1Q14676 2089 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 LOC100131303A0A0U1RQF7 123 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 A0A1W2PPH5 198 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 SIGLEC16A6NMB1 481 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 BTNL10A8MVZ5 291 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 MEI4A8MW99 385 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 C19orf81C9J6K1 198 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 XKRYO14609 159 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 TSPAN2O60636 221 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 GCM2O75603 506 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 ANP32DO95626 131 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 TSPAN13O95857 204 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 GBAP04062 536 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 CD74P04233 296 aa-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 S100BP04271 92 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 PFN1P07737 140 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.17-201ENST00000517256 LINGO3P0C6S8 592 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms