RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 OSTF1Q92882 214 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 STACQ99469 402 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 USB1Q9BQ65 265 aaKnown RBP13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 HDHD5Q9BXW7 423 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TMEM185BQ9H7F4 350 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 NGBQ9NPG2 151 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ZCCHC3Q9NUD5 404 aaKnown RBP13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 GIN1Q9NXP7 522 aa13.04□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TMEM114B3SHH9 223 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 H3BNH8 94 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 LSM1O15116 133 aaKnown RBP13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 LINGO3P0C6S8 592 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ATP6V1C1P21283 382 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ADH6P28332 368 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 MAPK1P28482 360 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ATP5J2P56134 94 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CARD18P57730 90 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 FOXF1Q12946 379 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ETFDHQ16134 617 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 RFTN2Q52LD8 501 aaPredicted RBP13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 TMEM201Q5SNT2 666 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 KANK2Q63ZY3 851 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 LILRA2Q8N149 483 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 EIF1ADQ8N9N8 165 aaKnown RBP13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CLHC1Q8NHS4 586 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 POC1BQ8TC44 478 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 FAM120BQ96EK7 910 aaKnown RBP13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 CHMP6Q96FZ7 201 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 NPAS1Q99742 590 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 RHOXF2Q9BQY4 288 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 HOXD1Q9GZZ0 328 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 PIGUQ9H490 435 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ATP6V1HQ9UI12 483 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 FIS1Q9Y3D6 152 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 ACTL7BQ9Y614 415 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 PRR14LQ5THK1 2151 aa13.03□□□□□ -0.32
SCARNA20.5-201ENST00000516991 SCAMP2O15127 329 aaKnown RBP13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 TRIM13O60858 407 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 NUDT14O95848 222 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 OPN1LWP04000 364 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 HMGN2P05204 90 aaKnown RBP13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 LINC00032P0C843 101 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 BCKDHAP12694 445 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 IL32P24001 234 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 SFTPDP35247 375 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 RPS4XP62701 263 aaKnown RBP13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 ZNF844Q08AG5 666 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 LASP1Q14847 261 aaKnown RBP13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 CD226Q15762 336 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 CCNJQ5T5M9 372 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 ADAM5Q6NVV9 412 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 CDC73Q6P1J9 531 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 TFAP2EQ6VUC0 442 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 C10orf107Q8IVU9 208 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 DDIASQ8IXT1 998 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 NATD1Q8N6N6 113 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 OR56A1Q8NGH5 318 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 PHOSPHO1Q8TCT1 267 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 C16orf58Q96GQ5 468 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 GATA5Q9BWX5 397 aaPredicted RBP13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 TUBB1Q9H4B7 451 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 SIRT3Q9NTG7 399 aaPredicted RBP13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 MKS1Q9NXB0 559 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 KLHL13Q9P2N7 655 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 BAIAP2L1Q9UHR4 511 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 RNF115Q9Y4L5 304 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 DNAJC15Q9Y5T4 150 aa13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 GPC6Q9Y625 555 aaPredicted RBP13.02□□□□□ -0.33
SCARNA20.5-201ENST00000516991 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 PLAUP00749 431 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 NID1P14543 1247 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 KRT4P19013 534 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 P2RX1P51575 399 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 ZNF117Q03924 483 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 PCLAFQ15004 111 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 GALNTL6Q49A17 601 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 PRIMA1Q86XR5 153 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 GABRG1Q8N1C3 465 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 SLC43A2Q8N370 569 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 ABHD3Q8WU67 409 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 TWIST2Q8WVJ9 160 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 UBLCP1Q8WVY7 318 aaPredicted RBP13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 ROBO4Q8WZ75 1007 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 AKAP1Q92667 903 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 CDS1Q92903 461 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 S100PBPQ96BU1 408 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 OTUB1Q96FW1 271 aaPredicted RBP13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 TRMT61AQ96FX7 289 aaKnown RBP13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 PPP3R2Q96LZ3 170 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 ACTRT3Q9BYD9 372 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 ESRP2Q9H6T0 727 aaKnown RBP13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 L2HGDHQ9H9P8 463 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 FBXO34Q9NWN3 711 aa13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 FAF1Q9UNN5 650 aaPredicted RBP13.01□□□□□ -0.33
SCARNA20.5-201ENST00000516991 INAFM1C9JVW0 142 aa13□□□□□ -0.33
SCARNA20.5-201ENST00000516991 NPHS1O60500 1241 aa13□□□□□ -0.33
SCARNA20.5-201ENST00000516991 GCM2O75603 506 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 540.8 ms